DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta3GalTII and sqv-2

DIOPT Version :9

Sequence 1:NP_610399.1 Gene:beta3GalTII / 35848 FlyBaseID:FBgn0033315 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_494394.1 Gene:sqv-2 / 173635 WormBaseID:WBGene00005020 Length:330 Species:Caenorhabditis elegans


Alignment Length:336 Identity:100/336 - (29%)
Similarity:157/336 - (46%) Gaps:75/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNLFLMVLVLSAPHNADERNAMRRTWLANAGQSIAQPYLPEELIYLPTFNAQGHLQVELVAEQAS 111
            |..||.:.:|::|:..:.|..:|.||.                                      
 Worm    56 PETFLYISILTSPNETERRQNVRDTWF-------------------------------------- 82

  Fly   112 RLRQYTNWQQSLLTEGPPRTKRLITVKHVFSIGTLDLSSSALAELEKEQNQNNDLLLLNRHHDTY 176
                      .|.|:||    .:...|  |::||:.|::.....|.:|..:..||.||:||.::|
 Worm    83 ----------RLSTKGP----SVFIAK--FAVGTMGLAAEDRRLLAEENEKFGDLALLDRHEESY 131

  Fly   177 KNLTAKLMQSLYILRRHYEFSYMLKVDDDTYVKLDSLVNTLVSYDRKLLRKRSEYRDHVLPQLYW 241
            :.|..|.:........:::|.:.||.|.|::|::..|:..|           .:.:|   |.|||
 Worm   132 ERLAKKTLACFVHAFANFKFKFFLKTDIDSFVRITPLIINL-----------KQIQD---PMLYW 182

  Fly   242 GYFNGRSTIKTKGQWKESSYYLSKNYLPYALGGGYVLSRSLCDYIVNNSQLLSHYGSEDVSVGTW 306
            |:.:||:....||:|||..:.|...||||.||||||||..|..::..|:||..||.:||||||.|
 Worm   183 GFLDGRAKPFRKGKWKEPEWNLCDRYLPYQLGGGYVLSYELIRFLAINAQLFRHYRNEDVSVGAW 247

  Fly   307 LAPLRHVYRWHDPRFDTSYAPRKCRSYHMVLHKRNGQMMRDIHD-----GELCSGIGSSILSDYY 366
            :..|...| .|||||||.:..|.|.:.:::.||...|.|:::.:     |:||:.......| |.
 Worm   248 IGGLDVKY-VHDPRFDTEWRSRGCNNEYLITHKHTEQEMQEMFENLKKTGKLCAKEFQKHPS-YV 310

  Fly   367 YDWTRTADKCC 377
            ||:::...:||
 Worm   311 YDFSKAPSECC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta3GalTIINP_610399.1 Galactosyl_T 125..319 CDD:304462 69/193 (36%)
sqv-2NP_494394.1 Galactosyl_T 72..259 CDD:304462 74/255 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164010
Domainoid 1 1.000 121 1.000 Domainoid score I3554
eggNOG 1 0.900 - - E1_KOG2288
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14549
Inparanoid 1 1.050 158 1.000 Inparanoid score I2904
Isobase 1 0.950 - 0 Normalized mean entropy S4324
OMA 1 1.010 - - QHG52323
OrthoDB 1 1.010 - - D465401at33208
OrthoFinder 1 1.000 - - FOG0005027
OrthoInspector 1 1.000 - - oto19918
orthoMCL 1 0.900 - - OOG6_107698
Panther 1 1.100 - - LDO PTHR11214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2813
SonicParanoid 1 1.000 - - X4084
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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