DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps25 and Vps25

DIOPT Version :10

Sequence 1:NP_610398.1 Gene:Vps25 / 35847 FlyBaseID:FBgn0022027 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001271340.1 Gene:Vps25 / 28084 MGIID:106354 Length:184 Species:Mus musculus


Alignment Length:180 Identity:75/180 - (41%)
Similarity:115/180 - (63%) Gaps:9/180 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FQWPWEYTFPPFFTLQPHEETRQQQLKVWTDLFLKYLRHTNRFTLSIGD-QNSPLFHNEALKR-- 65
            |:|||:|.|||||||||:.:|||:||..|..|.|.:.|...:.::::.: |.||||:|..|:|  
Mouse     5 FEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRHS 69

  Fly    66 ------RLSPELVLAILGELERSGHANPLDKRRQEWQVYWFTLEEYGNMVYDWVQETGQTNTICT 124
                  :|..|.:..:|.||.:.|:...|||.:..:.:.|...||:|.::|.||..:||.|::.|
Mouse    70 LNLKPGKLPVESIQIVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFT 134

  Fly   125 LYEIASGENTSHLDFYGVDEAVLLSALRLLEEKGRCELIEMDGSHGVKFF 174
            |||:.|||:|...:|:|:|||.||.||:.|:::.:.|:|.:....|||||
Mouse   135 LYELTSGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps25NP_610398.1 ESCRT-II 9..134 CDD:461763 53/133 (40%)
Vps25NP_001271340.1 ESCRT-II 10..147 CDD:461763 58/145 (40%)

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