DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps25 and vps25

DIOPT Version :9

Sequence 1:NP_610398.1 Gene:Vps25 / 35847 FlyBaseID:FBgn0022027 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_596423.1 Gene:vps25 / 2540828 PomBaseID:SPBC4B4.06 Length:175 Species:Schizosaccharomyces pombe


Alignment Length:169 Identity:56/169 - (33%)
Similarity:85/169 - (50%) Gaps:12/169 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PWEYTFPPFFTLQPHEETRQQQLKVWTDLFLKYLRHTNRFTLSIGDQ--NSPLFHNEALKRRLSP 69
            |..|.||||||.|.::.|...|...|....|.:.|...:.:::|..:  .|.|.||..:.|.|..
pombe     4 PSIYNFPPFFTRQLNDNTWHSQKAAWQMWILLWCRENRQTSITINPELLESSLLHNSTIHRTLPL 68

  Fly    70 ELVLAILGELERSGHANPLDKRRQE---WQVYWFTLEEYGNMVYDWVQETGQTNTICTLYEIASG 131
            .:...|:.::.:...|...:||..:   | |||.::.|:|||:..|:.:.|:..:|||.||:.  
pombe    69 SVFREIVEDMVKQNLAEWTEKRNPKDVFW-VYWRSISEWGNMILKWLSDMGREGSICTFYELQ-- 130

  Fly   132 ENTSHLDFYGVDEAVLLSALRLLEEKGRCELIEMDGSHG 170
            |....:|.  :||.:|...|.||.:||..||  |.||.|
pombe   131 EQYKEVDC--LDEVLLHKVLELLMKKGNIEL--MKGSSG 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps25NP_610398.1 ESCRT-II 9..143 CDD:283517 41/138 (30%)
vps25NP_596423.1 ESCRT-II 6..131 CDD:283517 39/127 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 75 1.000 Domainoid score I2505
eggNOG 1 0.900 - - E1_KOG4068
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6303
Inparanoid 1 1.050 86 1.000 Inparanoid score I1788
OMA 1 1.010 - - QHG54593
OrthoFinder 1 1.000 - - FOG0004660
OrthoInspector 1 1.000 - - oto101019
orthoMCL 1 0.900 - - OOG6_103180
Panther 1 1.100 - - LDO PTHR13149
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1645
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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