DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and Adgrl1

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_038953892.1 Gene:Adgrl1 / 65096 RGDID:620768 Length:1516 Species:Rattus norvegicus


Alignment Length:1581 Identity:375/1581 - (23%)
Similarity:595/1581 - (37%) Gaps:410/1581 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ACEGKKLTIECDPGDVINLIRANYGRFSITICN-DHGNVEWSVNCMFPKSLSVLNSRCAHKQSCG 88
            ||||..:.:.|...|||.:..|||||....||: |...:| :|.|..|.:..:::.||.::..|.
  Rat    40 ACEGYPIELRCPGSDVIMVENANYGRTDDKICDADPFQME-NVQCYLPDAFKIMSQRCNNRTQCV 103

  Fly    89 VLAATSMFGDPCPGTHKYLEAHYQCIS-------------------------------------- 115
            |:|.:..|.||||||:||||..|.|:.                                      
  Rat   104 VVAGSDAFPDPCPGTYKYLEVQYDCVPYKVEQKVFVCPGTLQKVLEPTSTHESEHQSGAWCKDPL 168

  Fly   116 -----------------------------AAQTSTT---TNRPSPPPWVLSNGPPIFG------- 141
                                         ||:.:||   .||.....:|:.:|...:.       
  Rat   169 QAGDRIYVMPWIPYRTDTLTEYASWEDYVAARHTTTYRLPNRVDGTGFVVYDGAVFYNKERTRNI 233

  Fly   142 ----------NGSGLIHPPGVGAGAP-------------PPPRLPTLPGVVGISG-------NPG 176
                      :|..:|:.......:|             ....|..:....|.:|       || 
  Rat   234 VKYDLRTRIKSGETVINTANYHDTSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRLVVSQLNP- 297

  Fly   177 LFNVPPQHTAVTHSTPSSSTTA--------------------VGGGRLKGGATSTTTTKHPAGRH 221
             :.:..:.|..|.....|::.|                    ..|.|:.....:....:.|... 
  Rat   298 -YTLRFEGTWETGYDKRSASNAFMVCGVLYVLRSVYVDDDSEAAGNRVDYAFNTNANREEPVSL- 360

  Fly   222 DGLPPPPQLHHHHNHHGEDTA----------------SPTKPSSKLPAGGNATSP----SNTRIL 266
             ..|.|.|.....:::..|..                .|..||:     |.||||    :.|...
  Rat   361 -AFPNPYQFVSSVDYNPRDNQLYVWNNYFVVRYSLEFGPPDPSA-----GPATSPPLSTTTTARP 419

  Fly   267 TGVGGSGTDDGTL------LTT-------KSSPNRPPGTAASGSVVPGNGSVVRTINNINLNAAG 318
            |.:..:.:...|.      |||       :..|:.||.||.:.|        .|.....||:.: 
  Rat   420 TPLTSTASPAATTPLRRAPLTTHPVGAINQLGPDLPPATAPAPS--------TRRPPAPNLHVS- 475

  Fly   319 MSGGDDESKLFCGPTHARNLYWNMTRVGDVNVQPCPGGAAGIAKWRCVLMKRIPDSGYDEYDDDI 383
                   .:|||.|...|.:.|..|:.|.:..:|||.|..|||.::|:                 
  Rat   476 -------PELFCEPREVRRVQWPATQQGMLVERPCPKGTRGIASFQCL----------------- 516

  Fly   384 SSTTPAPSGGDCLHNSSSCEPPVSMAHKVNQRLRNFEPTWHPATPDLTQCRSLWLNNLEMRVNQR 448
                  |:.|                            .|:|..|||:.|.|.|:|.:..::...
  Rat   517 ------PALG----------------------------LWNPRGPDLSNCTSPWVNQVAQKIKSG 547

  Fly   449 DSSLISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSEKMMHDKETF-PDQRQ-----------RE 501
            ::: .:||::::..|.. ::|.||:..:.|:::.:.:.:....:.. |.:|:           ||
  Rat   548 ENA-ANIASELARHTRG-SIYAGDVSSSVKLMEQLLDILDAQLQALRPIERESAGKNYNKMHKRE 610

  Fly   502 AMIMELLHCVVKTGSNLLDESQLSSWLDLNPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQK 566
            ....:.:..||:|..|||....|.||.|:|..:|:..||.||..||..||||||.:......:..
  Rat   611 RTCKDYIKAVVETVDNLLRPEALESWKDMNATEQVHTATMLLDVLEEGAFLLADNVREPARFLAA 675

  Fly   567 VKNILLSVRVLETKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNSEGGLVRIVFAAFDRLESIL 631
            .:|::|.|.||.|:.....:|||   |...|...|:|....:..||..|:|::||..::.|...|
  Rat   676 KQNVVLEVTVLSTEGQVQELVFP---QEYASESSIQLSANTIKQNSRNGVVKVVFILYNNLGLFL 737

  Fly   632 KPSYDHFDLKSSRSYVRNTAILSNDSDVNAGEIQQRLRILNSKVISASLGK-GRHIQLSQPITLT 695
            .               ...|.:....:...|.......::||:||:||:.| ...:.|..|:..|
  Rat   738 S---------------TENATVKLAGEAGTGGPGGASLVVNSQVIAASINKESSRVFLMDPVIFT 787

  Fly   696 LKHLKTENVTNPTCVFWNYIDHA----WSANGCSLESTNRTHSVCSCNHLTNFAILMDVVDEHQH 756
            :.||:.:|..|..|.||||.:.:    ||..||.|..:|:||:.|:|:||||||:||...:.:|.
  Rat   788 VAHLEAKNHFNANCSFWNYSERSMLGYWSTQGCRLVESNKTHTTCACSHLTNFAVLMAHREIYQG 852

  Fly   757 SLFTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLG 821
            .:..:.   :.:..::.|.|.:|.:.|.:.|.....|  :::.|.:|:.::.:.|...|||||:|
  Rat   853 RINELL---LSVITWVGIVISLVCLAICISTFCFLRG--LQTDRNTIHKNLCINLFLAELLFLVG 912

  Fly   822 IEQTETSIFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLEV--DQTPKVNCYYLLSYG 884
            |::|:..:.|......||...|:..:|.|.|..|.|.      ||:||  .:..:...|||..|.
  Rat   913 IDKTQYEVACPIFAGLLHYFFLAAFSWLCLEGVHLYL------LLVEVFESEYSRTKYYYLGGYC 971

  Fly   885 LSLSVVAISLVIDPSTYTQNDYCVLMEANALFYATFVIPVLVFFVAAIGYTFLSWII--MCRKSR 947
            ....||.|:..||..:|.....|.|...| .|..:|:.|  |.||..:...||...:  |.|.|.
  Rat   972 FPALVVGIAAAIDYRSYGTEKACWLRVDN-YFIWSFIGP--VSFVIVVNLVFLMVTLHKMIRSSS 1033

  Fly   948 TGLKTKEHTRLASVRFDIRCSFVFLLLLSAVWCSAYFYLRGAKMDDDTADVYGYCFICFNTLLGL 1012
            . || .:.:||.:::.....:...|.||...|.....::....:      |..|.|..||...|:
  Rat  1034 V-LK-PDSSRLDNIKSWALGAIALLFLLGLTWAFGLLFINKESV------VMAYLFTTFNAFQGV 1090

  Fly  1013 YIFVFHCIQNEKIRREYRKYVRQHAWLPKCLRC---------------SKTSISSGI-VTGNGPT 1061
            :||||||...:|:.:||.|.:| |::.  |:|.               |.|...:|. |.|.|..
  Rat  1091 FIFVFHCALQKKVHKEYSKCLR-HSYC--CIRSPPGGAHGSLKTSAMRSNTRYYTGTQVPGQGRH 1152

  Fly  1062 AGTLCSVSTSKKPKLPLGVSEEAHDDPQQQQQTPVPITEDAIMGATSDCEL----NEAQQRRTLK 1122
            ...: |:....:..||     |:..||..|.....|:|    .|......:    |:..:::| :
  Rat  1153 IHQV-SLGPRGRSALP-----ESQKDPGGQSGPGDPLT----FGLCPQSRIRRMWNDTVRKQT-E 1206

  Fly  1123 SGLMTGTLQAPPQ----TLGGHVVLERGSTLRSTGHASP-----TSSAG---STHLIFAHKQQQQ 1175
            |..|.|.:.:.|.    |:|.|::  ....|:..|..||     ..|.|   |:..:| :.....
  Rat  1207 SSFMAGDINSTPTLNRGTMGNHLL--TNPVLQPRGGTSPYNTLIAESVGFNPSSPPVF-NSPGSY 1268

  Fly  1176 QQQQGPLG-----------------ESY-YHQPDYYSWKQPSTGTGGLKTPREYYNNAGAAASSP 1222
            ::.:.|||                 .|| ....|:      ..|.||.:.||. .|.|.|||...
  Rat  1269 REPKHPLGGREACGMDTLPLNGNFNNSYSLRSGDF------PPGDGGPEPPRG-RNLADAAAFEK 1326

  Fly  1223 QQAHEVFYWTQKPNSGHNGKKKRGAGGVPASPSGSLHSRTAAASQVLFYPSYKKTKPGQPTGYPQ 1287
            ....|:.:...:..||       ||.|.|..|            .|...|...:.:.|.|.|..:
  Rat  1327 MIISELVHNNLRGASG-------GAKGPPPEP------------PVPPVPGVSEDEAGGPGGADR 1372

  Fly  1288 YAE------ALDPPLATGNAAAYYQQQQQLRRQQLHQQQQQQQQQQLSSDEEQAEQHAHLLHLQ- 1345
             ||      ||:.||....|.:.. .|..|...:....:.....:.|||...:...:|...:|: 
  Rat  1373 -AEIELLYKALEEPLLLPRAQSVL-YQSDLDESESCTAEDGATSRPLSSPPGRDSLYASGANLRD 1435

  Fly  1346 -------RRAGSQQQLPAPPP 1359
                   ...|..:.||.|||
  Rat  1436 SPSYPDSSPEGPNEALPPPPP 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328 33/80 (41%)
GAIN 453..680 CDD:293098 63/238 (26%)
GPS 705..752 CDD:197639 24/50 (48%)
7tm_4 763..1014 CDD:304433 68/254 (27%)
Adgrl1XP_038953892.1 Gal_Lectin 48..128 CDD:396628 33/80 (41%)
OLF 142..398 CDD:413369 27/259 (10%)
PHA03247 <398..482 CDD:223021 26/104 (25%)
HormR 476..539 CDD:214468 26/113 (23%)
GAIN 549..773 CDD:406802 64/243 (26%)
GPS 797..849 CDD:197639 24/51 (47%)
7tmB2_Latrophilin-1 856..1113 CDD:320673 79/279 (28%)
TM helix 1 859..883 CDD:320673 5/23 (22%)
TM helix 2 892..913 CDD:320673 7/20 (35%)
TM helix 3 923..945 CDD:320673 6/21 (29%)
TM helix 4 964..980 CDD:320673 6/15 (40%)
TM helix 5 999..1022 CDD:320673 8/25 (32%)
TM helix 6 1049..1071 CDD:320673 4/21 (19%)
TM helix 7 1075..1100 CDD:320673 12/30 (40%)
Latrophilin 1112..1516 CDD:396778 86/390 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8556
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I2154
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000766
OrthoInspector 1 1.000 - - otm45134
orthoMCL 1 0.900 - - OOG6_102405
Panther 1 1.100 - - O PTHR12011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X858
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.960

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