DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cirl and Adgrl4

DIOPT Version :10

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_071630.1 Gene:Adgrl4 / 64124 RGDID:621136 Length:738 Species:Rattus norvegicus


Alignment Length:788 Identity:183/788 - (23%)
Similarity:297/788 - (37%) Gaps:192/788 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 PGNGSVVRTINNINLNAAGMSGGDDESKLFCGPTHARNLYWNMTRVGDVNVQPCPGGAAGIAKWR 364
            |.:||..:.::..|..:.            || .||                .|.....|.:.: 
  Rat    99 PNDGSYCQDVDECNETSV------------CG-DHA----------------VCENTNGGFSCF- 133

  Fly   365 CVLMKRIPDSGYDEYDDDISSTTPAPSGGDCLHNSSSCEPPVS---------MAHKVNQRLRNFE 420
            ||          :.|......|...|:.|      |.|:..|:         :|..:|:.|:.. 
  Rat   134 CV----------EGYQTSTGKTQFTPNDG------SYCQEIVNSNCHLEHDCIAANINKTLKRI- 181

  Fly   421 PTWHPATPDLTQCRSLWLNNLEMRVNQRDSSLISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSE 485
               .|.|..||....::.|      ::.:.||:.|...:..:|.|.:|.|       .|..|.|.
  Rat   182 ---GPITEQLTLLHEIYKN------SEAELSLVDIVTYIEILTESSSLQG-------YIKNTTSP 230

  Fly   486 KMMHDKETFPDQRQREAMIMELLHCVVKTGSNLLDESQLSSWLDLNPEDQMRV-ATSLLTGLEYN 549
            |              :|.....|....||.:|.::::....| |..|.::.|: .|.|:...|:.
  Rat   231 K--------------DAYFGSALTEFGKTVNNFVEKNTHEMW-DQLPTNRRRLHLTKLMHAAEHV 280

  Fly   550 AFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNSEG 614
            ...::..|.:.........::.|.|.|.                     |.:.:.......|.:|
  Rat   281 TLQISQNIQKNTQFDMNSTDLALKVFVF---------------------DSVHMKHTHPHMNVDG 324

  Fly   615 GLVRI-------------VFAAFDRLESI--LKPSYDHFDLKSSRSYVRNTAILSNDSDVNAGEI 664
            |.|:|             |..||....||  |..|.|.|             :|...||.:.|  
  Rat   325 GYVKISPRRKSAYDPNGNVIVAFLCYRSIGPLLSSSDDF-------------LLGAQSDNSKG-- 374

  Fly   665 QQRLRILNSKVISASLGKGRHIQLSQP--------ITLTLKHLKTENVTNPTCVFWNY-IDH--- 717
              :.::::| |||||:.       |.|        ||.||.|:|..:.....|.|||| :|.   
  Rat   375 --KEKVISS-VISASIS-------SNPPTLYELEKITFTLSHVKLSDKHQTQCAFWNYSVDDMNN 429

  Fly   718 -AWSANGCSLESTNRTHSVCSCNHLTNFAILMD---VVDEHQHSLFTMFDGNMRIFIYISIGICV 778
             :||:.||.|..:|.||:.|.|:|||:|||||.   .::...:::.|..   .::.|.||: || 
  Rat   430 GSWSSEGCELTYSNDTHTSCRCSHLTHFAILMSPSTSIEVKDYNILTRI---TQLGIIISL-IC- 489

  Fly   779 VFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSIFCGFITIFLHCAIL 843
              :.|.:.|...|:.  ::|.||:|:.::...|...:|:||:||......:.|..|...||...|
  Rat   490 --LAICIFTFWFFSE--IQSTRTTIHKNLCCSLFLAQLVFLVGININTNKLVCSIIAGLLHYFFL 550

  Fly   844 SGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNCYYLLSYGLSLSVVAISLVIDPSTYTQNDYCV 908
            :..||.|.|..:.|..:..  |:.......|  .:|:..|.....||..|..:....|.....|.
  Rat   551 AAFAWMCIEGIYLYLIVVG--LIYNKGFLHK--NFYIFGYLSPAVVVGFSASLGYRYYGTTKVCW 611

  Fly   909 LMEANALFYATFVIPV-LVFFVAAIGYTFLSWIIMCRKSRTGLKTKEHTRLASVRFDIRCSFVFL 972
            |...|. |..:|:.|. |:..|..:.:..:.:.:.  :...||| .|.:...::|...|.:...|
  Rat   612 LSTENN-FIWSFIGPACLIILVNLLAFGVIIYKVF--RHTAGLK-PEVSCYENIRSCARGALALL 672

  Fly   973 LLLSAVWCSAYFYLRGAKMDDDTADVYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHA 1037
            .||...|.....::..|.:      |..|.|...|...|::||:|.|:.:.||:.||.:..:.  
  Rat   673 FLLGTTWTFGVLHVVHASV------VTAYLFTVSNAFQGMFIFLFLCVLSRKIQEEYYRLFKN-- 729

  Fly  1038 WLPKCLRC 1045
             :|.|..|
  Rat   730 -VPCCFEC 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137 52/246 (21%)
GPS 705..752 CDD:197639 24/54 (44%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 68/272 (25%)
TM helix 1 765..790 CDD:320557 7/24 (29%)
TM helix 2 801..823 CDD:320557 7/21 (33%)
TM helix 3 832..859 CDD:320557 9/26 (35%)
TM helix 4 875..895 CDD:320557 5/19 (26%)
TM helix 5 913..942 CDD:320557 6/29 (21%)
TM helix 6 960..987 CDD:320557 6/26 (23%)
TM helix 7 997..1022 CDD:320557 9/24 (38%)
Herpes_TAF50 <1219..1365 CDD:308764
Adgrl4NP_071630.1 EGF_CA 57..90 CDD:214542
EGF_CA 107..140 CDD:214542 10/72 (14%)
GAIN 186..361 CDD:465137 43/223 (19%)
GPS 416..460 CDD:460350 21/43 (49%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 417..467 24/49 (49%)
7tmB2_ETL 472..729 CDD:320553 69/279 (25%)
TM helix 1 474..499 CDD:320553 8/31 (26%)
TM helix 2 508..530 CDD:320553 7/21 (33%)
TM helix 3 539..566 CDD:320553 9/26 (35%)
TM helix 4 578..598 CDD:320553 6/21 (29%)
TM helix 5 615..644 CDD:320553 6/29 (21%)
TM helix 6 660..687 CDD:320553 6/26 (23%)
TM helix 7 691..716 CDD:320553 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.

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