DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and adgrb1a

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_009290826.1 Gene:adgrb1a / 563527 ZFINID:ZDB-GENE-060607-12 Length:1610 Species:Danio rerio


Alignment Length:1011 Identity:218/1011 - (21%)
Similarity:356/1011 - (35%) Gaps:259/1011 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 GTAASGSVVPGNGSVVRTINNINLNAAGMSGGDDESKLFCGPTHARNLYWNMTRVGDVNVQPCPG 355
            |....|...||:...||..|....         .|....|...:..|:.|..|..||.....||.
Zfish   554 GPFFGGEACPGDREEVRRCNEKRC---------PEPHEICDEENFSNVVWKKTPAGDTAAVRCPP 609

  Fly   356 GAAGIAKWRCVLMKRIPDSGYDEYDDDISSTTPAPSGGDCLHNSSSCEPPVSMAHKVNQRLRNFE 420
            .|.|:...||.|            |::..:....|:...|:.|                      
Zfish   610 NAVGLILRRCSL------------DNEGIAYWENPTYMKCVSN---------------------- 640

  Fly   421 PTWHPATPDLTQCRSLWLNNLEMRVNQRDSSLISIANDMSEV-------TSSKTLYGGDMLVTTK 478
                    |....::|..::|...  ||.    .:.:.:|||       :|..|.|.||:|....
Zfish   641 --------DYRSIQTLTRDHLSKA--QRG----LVGDGVSEVMTKLRVTSSDGTSYSGDLLAIID 691

  Fly   479 IIQTVSE--KMMHDKETFPDQRQREAMIMELLHCVVKTGSNLLDESQLSSW-----LDLNPEDQM 536
            :::.::|  :..:...:..|.|.           .|::.||||.|.....|     |..|.::..
Zfish   692 VLKNMTEIFRRSYYSPSNADMRN-----------FVQSVSNLLMEENRDRWEEAQLLGPNVKELF 745

  Fly   537 RVATSLLTGLEYNAFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSSVVFPDSD-----QWPL 596
            |:....:..:........||       .:...|::||:....... .:.:.||...     .|..
Zfish   746 RLVEDFVDVISLRMKDFQDT-------YEVTDNLVLSIHKRPVAG-NADITFPMKGWRGMVDWAR 802

  Fly   597 SS-DRIELPRAALIDNSEGGLVRIVFAAFDRLESILKPSYDHFDLKSSRSYVRNTAILSNDSDVN 660
            || |::.:.:..|:..                    ||..|     .:.::|....:..|...:.
Zfish   803 SSEDKVRVAKNILLTG--------------------KPEED-----DASAFVTGIVLYRNLGSIL 842

  Fly   661 AGEIQQRLRILNSKVISASLGKGRHIQLSQPITLTLKHLKTENVTNPTCVFWNYIDH-----AWS 720
            :  :|:...:|||||||.:: |.....||.|:.:...|| ....||.||:.|:..|.     :||
Zfish   843 S--LQRNSTVLNSKVISVTI-KPTPSSLSSPLEIEFSHL-YNGTTNQTCISWDENDSSSLLGSWS 903

  Fly   721 ANGCSLESTNRTHSVCSCNHLTNFAILM----DV-VDEHQHSLFTMFDGNMRIFIYISIGICVVF 780
            |.||.....:.:.:.|.|:.|:.||||.    || :|:.|....|:..|            |.|.
Zfish   904 ARGCRAVPVDSSTTKCLCDRLSTFAILARLNPDVNMDKTQLPSVTLIVG------------CGVS 956

  Fly   781 IVIALLTLKLFNGV--FVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSIFCGFITIFLHCAIL 843
            .:..||.:.::..|  :::|.|:.|..:..|.:::...|.|:|..||...:.|..:..|||...|
Zfish   957 SLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHFFFL 1021

  Fly   844 SGTAWFCYEAFHSYSTLTS---DELLLEVDQTPKVNCYYLLSYGLSLSVVAISLVIDPST-YTQN 904
            |...|...||:.||..:|.   :.::.:        .:..|.:||...|||||:....:. |...
Zfish  1022 SSFCWVLTEAWQSYMAVTGRLRNRIIRK--------RFLCLGWGLPALVVAISVGFTKAKGYGTV 1078

  Fly   905 DYCVLMEANALFYATFVIP----VLVFFVAAIGYTFLSWIIMCRKSRTGLKTKEHTRLASV---R 962
            :||.|.....|.|| ||.|    |||..|  ||....:.:: .:...|.:|.||.....:|   .
Zfish  1079 NYCWLSLEGGLLYA-FVGPAAAVVLVNMV--IGILVFNKLV-SKDGITDMKLKERAGQMTVPLYN 1139

  Fly   963 FDIRC-------------------------SFVFLLLLSAVWCSAYFYLRGAKMDDDTADVYGYC 1002
            ..::|                         |.|.|.||:..|.||..     .:.|..:.::...
Zfish  1140 MTLKCAKCGVISSPDVSTTATSNAMASLWSSCVVLPLLALTWMSAVL-----AITDRRSALFQIL 1199

  Fly  1003 FICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKCLRCSKTSISSGIVTGNGPTAGTL-- 1065
            |..|::|.|..|.:.|||    :|||.::.|       ||....:..      .|||.:.|:.  
Zfish  1200 FAVFDSLEGFVIVMVHCI----LRREVQEAV-------KCRVVDRQE------DGNGDSGGSFQN 1247

  Fly  1066 --CSVSTSKKPKLPLGVSEEAHDDPQQQQQTPVPITEDAIMGATSDCELNEAQQRRTLKSGLMTG 1128
              ..:.|..:..:.:.........|.||.:..||                  .|:.|::.|....
Zfish  1248 GHAQLMTDFEKDVDIACRSGTLKRPSQQGEEKVP------------------SQQITVQKGSNFN 1294

  Fly  1129 TLQAPPQTL--------GGHVVLERGSTLRSTGHASPTSSAGSTHLIFAHKQQQQQQQQGPL--- 1182
            ||.|....:        ..|.:..|.......|.::....|.|.::......:|.....|.:   
Zfish  1295 TLPASMAKVHLQNVANYASHTLTMRRDKGAIAGVSTELPGAKSIYICDGELFKQLDGAPGDIPEG 1359

  Fly  1183 -----GESYYHQPDYYSWKQPSTGTGGLKTPREYYN 1213
                 |:.|...|:..:..:|:  .||.:.|...||
Zfish  1360 GGGGAGQGYVLLPNNNNTLRPT--KGGKEDPAAKYN 1393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 47/246 (19%)
GPS 705..752 CDD:197639 20/56 (36%)
7tm_4 763..1014 CDD:304433 70/288 (24%)
adgrb1aXP_009290826.1 TSP1 242..291 CDD:214559
TSP1 360..408 CDD:214559
TSP1 418..468 CDD:214559
TSP1 473..523 CDD:214559
TSP1 528..578 CDD:214559 7/32 (22%)
HRM 580..646 CDD:295297 18/107 (17%)
GAIN 665..860 CDD:293098 47/240 (20%)
GPS 886..930 CDD:280071 14/43 (33%)
7tm_4 944..1211 CDD:304433 71/295 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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