DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and Adgrg3

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_766624.3 Gene:Adgrg3 / 54672 MGIID:1859670 Length:542 Species:Mus musculus


Alignment Length:545 Identity:122/545 - (22%)
Similarity:204/545 - (37%) Gaps:109/545 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 EDQMRVATSLLTGLEYNAFLLADTI-------IRERSVVQKVKNILLSVRVLETKTIQSSVVFPD 590
            |:...|...|..|.||:.|.|.||.       ..|.|... |.|:.......|:..:::|:    
Mouse    23 EEPRNVCRRLQEGHEYDTFDLNDTAQCFTKCGQSEHSPCD-VGNLQRYWLNYESYLLENSM---- 82

  Fly   591 SDQWPLSSDRIELPRA-ALIDN-----SEGGLVRIVFAAFDR---------LESILKPSYDHFDL 640
                    :.:::|.. |||.|     ||..|..::.:...|         .:.:..|......|
Mouse    83 --------ETVDMPFVKALIQNISTDVSEDLLYSLMLSQIPRQVMQGEDEPADGVRLPKSLFGAL 139

  Fly   641 KSSRSYVRNTAILSNDSDVNAGEI--------QQRLRILNSKVISASLGKGRHIQLSQPITLTLK 697
            ..:||.||   :.....|:.||.:        .:...:||::::..|:|:.....||:|:.:|..
Mouse   140 PGNRSAVR---LAITVLDIGAGNVFKGPKLLEDKGSSVLNNRMVGLSVGQMHATGLSEPVEITFS 201

  Fly   698 HLKTENVTNPTCVFWNYIDHAWSANGCS-LESTNRTHSVCSCNHLTNFAILM-DVVDEHQHSLFT 760
            |.:.......|||||:.....|.::||| :....||  ||.|:|||.||:|: .::|.......|
Mouse   202 HERQPPNVILTCVFWDMAKGDWDSHGCSTVPGDGRT--VCRCDHLTFFALLLRPILDLATAQTLT 264

  Fly   761 MFD--GNMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIE 823
            ...  |:....|:::      |.::..:..:.....|.......|:.::.:.|..:.|.||:.:.
Mouse   265 RISQAGSAVSMIFLA------FTMVLYVAFRFSLQRFKSEDAPKIHMALSISLFLLNLTFLINVG 323

  Fly   824 QTETS--IFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNCYY------- 879
            .:...  ..|.......|..:|....|...||||.|.      |.:.|     .|.|:       
Mouse   324 SSSQGPPASCWVRAAIFHYFLLCVFTWMGLEAFHLYL------LAIRV-----FNTYFGHYFLKL 377

  Fly   880 -LLSYGLSLSVV---------AISLVIDPSTYTQNDYCVLMEANALFYATFVIPVLVFFVAAIGY 934
             ||::||.:.||         .:..:.|....|..:.|...:..||:.......::.|...|:..
Mouse   378 SLLAWGLPVLVVIGAGSSNSYGVYTIRDQENRTSLELCWFQKEPALYATVHGYFLVTFLFGAVVL 442

  Fly   935 TFLSWIIMCRKSRTGLKTKEHTRLASVRFDIRCSFVFLLLLSAV----WCSAYFYLRGAKMDDDT 995
            ..::|.|....|.|..|.:..|..         |.:.:|.||::    |..|.....|....   
Mouse   443 ALVAWKIFTLPSVTAGKGQGPTWK---------SVLTVLGLSSLVGMTWGLAVLTPLGLSTI--- 495

  Fly   996 ADVYGYCFICFNTLLGLYIFVFHCI 1020
                 |.|...|:|.||:||.:..|
Mouse   496 -----YVFTLLNSLQGLFIFCWFII 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 36/176 (20%)
GPS 705..752 CDD:197639 20/48 (42%)
7tm_4 763..1014 CDD:304433 54/275 (20%)
Adgrg3NP_766624.3 GPS 211..250 CDD:280071 19/40 (48%)
7tm_4 262..509 CDD:304433 55/280 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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