DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and Adgrf2

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_017173054.1 Gene:Adgrf2 / 435529 MGIID:2182728 Length:673 Species:Mus musculus


Alignment Length:749 Identity:155/749 - (20%)
Similarity:267/749 - (35%) Gaps:165/749 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 AKWRCVLMKRIP-------DSGYDEYDDDISSTTPAPSGGDCLHNSSSCE---PPVSMAHKVNQR 415
            |.|...||..:|       .....:..:.::|.......|.|.:|.:.|.   ||.|   :.|.:
Mouse     4 AHWLYCLMLLLPIESCRILCQASSKSKEKVTSRPHDVCDGVCNNNGTPCFQSCPPDS---EGNMK 65

  Fly   416 LRNFEPTWHPATPDLTQCRSLWLNNLEMRVNQRDSSLISIANDMSEVTSSKTLYGGDMLVTTKII 480
            .......||..|   ..|.:|..::    :.:.|..|.|:.:  |:.|....::..::   ..|:
Mouse    66 FACKAKKWHKVT---ETCHTLNTHS----IFEEDKELYSVQS--SDSTIRTHMFHREL---KTIM 118

  Fly   481 QTVSEKMMHDK-------ETFPDQRQREAMIMELLHCVVKT----------------GSNLLDES 522
            .|:.||...|.       |..|......|::::|||.:..|                .:::|:..
Mouse   119 DTLMEKCPKDLSCVIKGIERSPRMPGNIAVVVQLLHNISTTLTKDVNEEKMQSYSAMANHILNSK 183

  Fly   523 QLSSWLDLNPEDQMRVATSLLTGLEYNAFL-------------LADTIIRERSVVQKVKNILLSV 574
            .:|:|..:...:...|....:.......|:             ...|::...|:   .||...|:
Mouse   184 SISNWTFIQDRNSSCVLLQSIHSFASKLFMKEHLINISHVFIHTLGTVVSRGSL---GKNFTFSM 245

  Fly   575 RVLET--KTIQSSVVFPDSDQWPLSSDRIELPRAALIDNSEGGLVRIVFAAFDRLESILKPSYDH 637
            |:.||  |.....::.|:..|        ::|.|          .:::..||..|.:||:.|   
Mouse   246 RINETSDKVTGRLLLSPEELQ--------KVPSA----------FQVISIAFPTLGAILEAS--- 289

  Fly   638 FDLKSSRSYVRNTAILSNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQLSQPITLTLKHLKTE 702
                          :|.|.:             :|..|:|..|.:    :|.. |:|..:.::..
Mouse   290 --------------LLENVT-------------VNGLVLSVILPE----ELKN-ISLIFEKIRKS 322

  Fly   703 NVTNPTCVFWNYIDHAWSANGCSLESTNRTHSVCSC--NHL-TNFAILMDVVDEHQHSLFTMFDG 764
            ......||.|:.::..|....|.....|...:||.|  |.| |:|:|||        |..|:...
Mouse   323 GERKSQCVGWHSLESRWDWRACKTIQENSRQAVCRCRPNKLYTSFSILM--------SPNTLESP 379

  Fly   765 NMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSI 829
            .:....||.:||.:..::|.|....|   |:.:..:|.|....:||:..|....|:.......:.
Mouse   380 VLTYITYIGLGISICSLIICLAIEVL---VWSQVTKTEISYLRHLCIANIAATLLMADAWFIVAS 441

  Fly   830 F----------CGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPK---VNCYYLL 881
            |          |...|.|:|...||...|...:|.     |....:|:.....||   |...:.:
Mouse   442 FLSGPVLHHNGCVAATFFVHFFYLSVFFWMLAKAL-----LILYGILIVFHTLPKSCLVASLFSV 501

  Fly   882 SYGLSLSVVAISL-VIDPST-YTQNDYCVLMEANALFYATFVIPVLVFFVAAIGYTFLSWIIMCR 944
            .||..|.:..|:| |.:|.. |.:.:.|.|..........||:|.|...|..: .|....||..:
Mouse   502 GYGCPLVIAIITLAVTEPGKGYLRPEACWLNWDMTKALLAFVVPALAIVVVNL-ITVTMVIIKTQ 565

  Fly   945 KSRTGLKTKEHTRLASVRFDIRCSFVFLL--LLSAVWCSAYFYLRGAKMDDDTADVYGYCFICFN 1007
            ::..|....:..| |.||.   |..:.:|  ||...|....     |.:.:..:..:...|...|
Mouse   566 RAAIGSSMFQEVR-AIVRI---CKNIAILTPLLGLTWGFGI-----ATVINGHSLAFHIIFSLLN 621

  Fly  1008 TLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPK 1041
            .|.|.:|.:|..|.:.|||...:..:....|:.:
Mouse   622 ALQGFFILLFGTILDPKIREALKSRITSAKWISR 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 44/264 (17%)
GPS 705..752 CDD:197639 16/49 (33%)
7tm_4 763..1014 CDD:304433 61/267 (23%)
Adgrf2XP_017173054.1 GPS 326..373 CDD:383024 16/54 (30%)
7tmB2_GPR111_115 378..644 CDD:320660 67/283 (24%)
TM helix 1 381..405 CDD:320660 6/23 (26%)
TM helix 2 420..441 CDD:320660 4/20 (20%)
TM helix 3 454..476 CDD:320660 6/21 (29%)
TM helix 4 497..513 CDD:320660 3/15 (20%)
TM helix 5 535..558 CDD:320660 6/23 (26%)
TM helix 6 581..606 CDD:320660 8/32 (25%)
TM helix 7 611..636 CDD:320660 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.