DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cirl and mthl5

DIOPT Version :10

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster


Alignment Length:342 Identity:74/342 - (21%)
Similarity:132/342 - (38%) Gaps:77/342 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   715 IDHAWSANGCSLESTNRTHSVCSCNHL-----TNFAILMDVVDEHQHSLFTMFDGNMRIFIYISI 774
            ||.|.|:.|   |......::|.....     :||.:        :..|..:|.|   |.:.|.:
  Fly   181 IDKATSSTG---EENVLFANICLARKEIKWSDSNFLL--------RKILNPIFHG---ISLVILL 231

  Fly   775 GICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSIFCGFIT--IF 837
            .|.:::.::..|:..|..         :|.|:|.:||:..:...|:.| .||.:....||.  |.
  Fly   232 VIAIIYFILPTLSRDLVG---------NIVTTIAMCLMVSQAADLVRI-FTELTSHVSFIVADII 286

  Fly   838 LHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNCYY-LLSYGLSLSVVAISL----VID 897
            |..::|:...|.....|:.:.|..|..:.|.|....|. ||| ..::|.:.::.|:::    .:|
  Fly   287 LCFSLLAAFFWLNSFGFYIWKTFRSRNVFLRVTDGRKY-CYYSAYAWGCTATMAALAVFAHFFLD 350

  Fly   898 PSTYTQNDYCVLMEANALFYATFVIPVLVFFVAAIGYTFLSWIIMCRKSRTGLKTKEHTRLASVR 962
            ..:|.|..  ::.|...:.:    :.:.:|| |.|..|.|..|.....:|..:..:  |....:.
  Fly   351 AESYKQEH--MVGEQETIGW----LGICIFF-APIACTILVNIFFYVTTRKLINRR--TVYGRIA 406

  Fly   963 FDIRCSFV----FLLLLSAVW---CSAYFYLRGAKMDDDTADVYGYCFICFNTL---LGLYIFVF 1017
            ..::.:|:    .||::|..|   ..::..:.|..          |..|..|.|   |.|||.|.
  Fly   407 HKLKANFIMFSLMLLVMSIAWLFLIMSWLQMEGLL----------YAHIVVNALQTPLLLYICVL 461

  Fly  1018 H-----------CIQNE 1023
            .           |..||
  Fly   462 RQRHVTFLLKKTCCYNE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137
GPS 705..752 CDD:197639 9/41 (22%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 63/289 (22%)
TM helix 1 765..790 CDD:320557 4/24 (17%)
TM helix 2 801..823 CDD:320557 6/21 (29%)
TM helix 3 832..859 CDD:320557 7/28 (25%)
TM helix 4 875..895 CDD:320557 5/24 (21%)
TM helix 5 913..942 CDD:320557 7/28 (25%)
TM helix 6 960..987 CDD:320557 5/33 (15%)
TM helix 7 997..1022 CDD:320557 10/38 (26%)
Herpes_TAF50 <1219..1365 CDD:308764
mthl5NP_001287291.1 7tmB3_Methuselah-like 215..474 CDD:410632 62/291 (21%)
TM helix 1 215..239 CDD:410632 6/26 (23%)
TM helix 2 249..271 CDD:410632 7/31 (23%)
TM helix 3 281..308 CDD:410632 6/26 (23%)
TM helix 4 324..344 CDD:410632 5/20 (25%)
TM helix 5 371..396 CDD:410632 8/25 (32%)
TM helix 6 409..435 CDD:410632 5/25 (20%)
TM helix 7 438..463 CDD:410632 10/34 (29%)
Blue background indicates that the domain is not in the aligned region.

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