DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and mth

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster


Alignment Length:604 Identity:118/604 - (19%)
Similarity:216/604 - (35%) Gaps:202/604 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   563 VVQKVKNILLSVRVLETKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNS----EGGLVRIVFAA 623
            :|.::..::|.|.|::    :|.....:.|.:    |.:::..|..:.|.    ||.||..:...
  Fly     5 LVLRISTVILVVLVIQ----KSYADILECDYF----DTVDISAAQKLQNGSYLFEGLLVPAILTG 61

  Fly   624 --------FDRLESI----------LKP------SYDHFDLKSSRSYVRNTAILSNDSDVNAGEI 664
                    .|..:.:          |||      .:||.        :.|.....|.||....|:
  Fly    62 EYDFRILPDDSKQKVARHIRGCVCKLKPCVRFCCPHDHI--------MDNGVCYDNMSDEELAEL 118

  Fly   665 QQRLRILNSKVISASLGKGRHIQLSQPITLTLKHLKTENVTNPTCVFWN---------YIDHAWS 720
            ...|.:        :|..|         :::.:|.|.|.:     |.|:         |:|:...
  Fly   119 DPFLNV--------TLDDG---------SVSRRHFKNELI-----VQWDLPMPCDGMFYLDNREE 161

  Fly   721 ANGCSL-----------ESTNRTHSVCSCNHLTNFAILMDVVDEHQHSLFTMFDGN---MRI--- 768
            .:..:|           ..|.|....| ..||| ||                 |||   :||   
  Fly   162 QDKYTLFENGTFFRHFDRVTLRKREYC-LQHLT-FA-----------------DGNATSIRIAPH 207

  Fly   769 ------------FIYISIGICVVFIVIALLTLKLFNGVFVKSART---SIYTSIYLCLLAIELLF 818
                        .:.||..||:|      ||:.::  :|||..:.   ..:....:||....|..
  Fly   208 NCLIVPSITGQTVVMISSLICMV------LTIAVY--LFVKKLQNLHGKCFICYMVCLFMGYLFL 264

  Fly   819 LLGIEQTETSIFC---GFITIFLHCAILSGTAWFCYEAFHSYSTL-----TSDELLLEVDQTPKV 875
            ||.:.|...| ||   ||:..|.   :::...|....:.|.::|.     .::..|.|    .:.
  Fly   265 LLDLWQISIS-FCKPAGFLGYFF---VMAAFFWLSVISLHLWNTFRGSSHKANRFLFE----HRF 321

  Fly   876 NCYYLLSYGLSLSVVAISLVIDPSTYTQN--------DYC-VLMEA-NALFYATFVIPVLVFFVA 930
            ..|...::|:::.:..|:::.|.....|:        .:| :..:| :|:.|  |..| :||.:|
  Fly   322 LAYNTYAWGMAVVLTGITVLADNIVENQDWNPRVGHEGHCWIYTQAWSAMLY--FYGP-MVFLIA 383

  Fly   931 AIGYTFLSWIIMCRK------------SRTGLKTKEHTRLASVRFDIRCSFVFLLLLSAVWCSAY 983
               :....:|:..::            .|...|.|.::...:..|.:|. |:.:.|..::...:|
  Fly   384 ---FNITMFILTAKRILGVKKDIQNFAHRQERKQKLNSDKQTYTFFLRL-FIIMGLSWSLEIGSY 444

  Fly   984 FYLRGAKMDDDTADVY---GYCFICFNTLLGLYIFVFHCIQNE--KIRREYRKYVRQHAWLPKCL 1043
            |    ::.:...|:|:   .|    .|...|:.||:...::..  ::.:|     |.|   ||..
  Fly   445 F----SQSNQTWANVFLVADY----LNWSQGIIIFILFVLKRSTWRLLQE-----RNH---PKST 493

  Fly  1044 R--CSKTSISSGIVTGNGP 1060
            |  .|..|::|.|..|..|
  Fly   494 RSVISNRSMASRITVGTTP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 25/144 (17%)
GPS 705..752 CDD:197639 13/66 (20%)
7tm_4 763..1014 CDD:304433 61/304 (20%)
mthNP_728521.1 Methuselah_N 29..209 CDD:284145 43/232 (19%)
7tm_4 219..416 CDD:304433 44/218 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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