DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cirl and Adgrb3

DIOPT Version :10

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001100368.1 Gene:Adgrb3 / 301309 RGDID:1309703 Length:1522 Species:Rattus norvegicus


Alignment Length:1035 Identity:217/1035 - (20%)
Similarity:363/1035 - (35%) Gaps:305/1035 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 VRTINNINLNAAGMSGGDDESKL-----------FCGPTHARNLYWNMTRVGDVNVQPCPGGAAG 359
            |||...:.:......|..:|.:.           .|......::.|..|..||:....||..|.|
  Rat   479 VRTCQGVTVTGQQCEGTSEEIRRCSEQRCPAPYEICPEDVLISMVWKRTPAGDLAFNQCPLNATG 543

  Fly   360 IAKWRCVLMKRIPDSGYDEYDDDISSTTPAPSGGDCLHNSSSCEPPVSMAHKVNQRLRNFEPTWH 424
            ....||.|                           .||..:|.|.| |.|..::...|:.:   |
  Rat   544 TTSRRCSL---------------------------SLHGVASWEQP-SFARCISNEYRHLQ---H 577

  Fly   425 PATPDLTQCRSLWLNNLEMRVNQRDSSLISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSEKMMH 489
            .....|.:.:.:...:          .:..:...:.::|..|..|.||:||:.:|::.|:     
  Rat   578 SIKEHLAKGQRMLAGD----------GMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVT----- 627

  Fly   490 DKETFPDQRQREAMIMELLHCVVKTGSNLLDESQLSSWLDLNPEDQMRV---ATSLLTGLE---- 547
              :||  :|.......:.:....:..||||||.....|     ||..::   :..|:..:|    
  Rat   628 --DTF--KRASYIPASDGVQNFFQIVSNLLDEENKEKW-----EDAQQIYPGSIELMQVIEDFIH 683

  Fly   548 ---------YNAFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSSVVFPDSDQ-----WPLSS 598
                     .|::|:..             |::.|::.|...::.:.:.||...:     |..:|
  Rat   684 IVGMGMMDFQNSYLMTG-------------NVVASIQKLPAASVLTDINFPMKGRKGMVDWARNS 735

  Fly   599 -DRIELPRAAL-------IDNSEGGLVRIVFAAFDRLESILKPSYDHFD--LKSSRSYVRNTAIL 653
             ||:.:|::..       :|.|.      ||.    |.::|   |.:.|  |.:.|:|.      
  Rat   736 EDRVVIPKSIFTPVSSKELDESS------VFV----LGAVL---YKNLDLILPTLRNYT------ 781

  Fly   654 SNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQLSQP------ITLTLKHLKTENVTNPTCVFW 712
                            ::|||:|..::       ..:|      :.:.|.|| .....||.||.|
  Rat   782 ----------------VVNSKIIVVTI-------RPEPKRTDAFLEIELAHL-ANGTLNPYCVLW 822

  Fly   713 -----NYIDHAWSANGCSLESTNRTHSVCSCNHLTNFAILMDVVDEHQHSLFTMFDGNMRIFIYI 772
                 |.....||..||....|:.:|:.|.|:.|:.||||.    :....:.....|...:.:.:
  Rat   823 DDSKSNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILA----QQPREIVMESSGTPSVTLIV 883

  Fly   773 SIGI-CVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSIFCGFITI 836
            ..|: |:..|.:|::...|:.  :::|.|:.|..:..|.:::..:|.|:|..||.....|...|.
  Rat   884 GSGLSCLALITLAVVYAALWR--YIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTA 946

  Fly   837 FLHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNC------YYLLSYGLSLSVVAISLV 895
            |||...|:...|...||:.||..:|.           |:..      :..|.:||...|||.|:.
  Rat   947 FLHFFFLASFCWVLTEAWQSYMAVTG-----------KIRTRLIRKRFLCLGWGLPALVVATSVG 1000

  Fly   896 IDPST-YTQNDYCVLMEANALFYA-----------TFVIPVLVF--FVAAIGYTFLSWIIMCR-- 944
            ...:. |..:.||.|.....|.||           ..||.:|||  .|:..|       |:.:  
  Rat  1001 FTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDG-------ILDKKL 1058

  Fly   945 KSRTGLKTKEHTRLASVRFDIRC-------------------------SFVFLLLLSAVWCSAYF 984
            |.|.|..::.|:.|.     ::|                         |.|.|.||:..|.||..
  Rat  1059 KHRAGQMSEPHSGLT-----LKCAKCGVVSTTALSAATASNAMASLWSSCVVLPLLALTWMSAVL 1118

  Fly   985 YLRGAKMDDDTADVYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKCLRCSKTS 1049
                 .|.|..:.::...|..|::|.|..|.:.|||...:::..:|..:|      .|.......
  Rat  1119 -----AMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLR------NCQDPINAD 1172

  Fly  1050 ISSGIVTGNGPTAGTLCSVSTSKKPKLPLGVSEEAHDDPQQQQQTPVPITEDAIMGATSDCELN- 1113
            .||....|:       ..:.|..:..:.:......|.|..       |.....|.|..|...|| 
  Rat  1173 SSSSFPNGH-------AQIMTDFEKDVDIACRSVLHKDIG-------PCRAATITGTLSRISLND 1223

  Fly  1114 EAQQRRTLKSGLMTGTL----------QAP-----PQTLG--GHVVLERGST-LRSTGHASPTSS 1160
            |.:::.|...||...||          |.|     |.::.  .:..|::.:| ||.|.:.....:
  Rat  1224 EEEEKGTNPEGLSYSTLPGNVISKVIIQQPTALHMPMSMNELSNPCLKKENTELRRTVYLCTDDN 1288

  Fly  1161 AGSTHLIFAHKQQQQQQQQGPLGESYY---------HQPDYYSWKQPSTGTGGLKT-PRE 1210
            .....:...|.|::..       ||.|         .||   |.|:.|....|::| |.|
  Rat  1289 LRGADMDIVHPQERMM-------ESDYIVMPRSSVSTQP---SMKEESKMNIGMETLPHE 1338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137 50/261 (19%)
GPS 705..752 CDD:197639 19/51 (37%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 75/319 (24%)
TM helix 1 765..790 CDD:320557 4/25 (16%)
TM helix 2 801..823 CDD:320557 5/21 (24%)
TM helix 3 832..859 CDD:320557 10/26 (38%)
TM helix 4 875..895 CDD:320557 7/25 (28%)
TM helix 5 913..942 CDD:320557 10/41 (24%)
TM helix 6 960..987 CDD:320557 9/51 (18%)
TM helix 7 997..1022 CDD:320557 8/24 (33%)
Herpes_TAF50 <1219..1365 CDD:308764
Adgrb3NP_001100368.1 AGRB_N 30..201 CDD:465991
TSP1 296..343 CDD:214559
TSP1 348..398 CDD:214559
TSP1 403..452 CDD:214559
TSP1 458..508 CDD:214559 5/28 (18%)
HormR 510..576 CDD:214468 20/93 (22%)
GAIN 594..794 CDD:465137 50/268 (19%)
GPS 816..867 CDD:197639 19/54 (35%)
7tmB2_BAI3 872..1164 CDD:320655 76/327 (23%)
TM helix 1 876..901 CDD:320655 4/24 (17%)
TM helix 2 911..933 CDD:320655 5/21 (24%)
TM helix 3 942..970 CDD:320655 10/27 (37%)
TM helix 4 980..1000 CDD:320655 7/19 (37%)
TM helix 5 1018..1047 CDD:320655 8/28 (29%)
TM helix 6 1094..1121 CDD:320655 8/31 (26%)
TM helix 7 1126..1151 CDD:320655 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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