DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cirl and Adgrf3

DIOPT Version :10

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001401841.1 Gene:Adgrf3 / 298857 RGDID:1305868 Length:992 Species:Rattus norvegicus


Alignment Length:783 Identity:163/783 - (20%)
Similarity:285/783 - (36%) Gaps:230/783 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 WNMTRVGDVNVQPCPGGAAGIAKWRCVLMKRIPDSGYDEYDDDISSTTPAPSGGDCLHNSSSCEP 404
            ||:|:.|.:...|||....|:.|..|                        .|.|           
  Rat   362 WNVTKAGFMAQAPCPMNKTGVVKRLC------------------------GSNG----------- 391

  Fly   405 PVSMAHKVNQRLRNFEPTWHPATPDLTQCRSLWLNN-----LE------------MRVNQRDSSL 452
                             .|.|.....|:.:.|.|.:     ||            :|..||...:
  Rat   392 -----------------IWGPVQDSCTEAKILDLYSKAKLLLEGQGKPNEQVPRILRELQRQVGV 439

  Fly   453 ISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSEKMMHDKETFPDQRQREAMIMELLHCVVKTGSN 517
            :|..:|:.|:..:.||       ..|::...|.::            .:..:.:||    .|...
  Rat   440 VSTPSDLREMLHTVTL-------LAKVVAETSTEL------------TDRALKDLL----TTTDK 481

  Fly   518 LLDESQLSSWLDLNPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQ-----KVKNILLSVRVL 577
            :||.:..|.| .|....:..:.:..|..:|        |::...|..|     ...|:||..::|
  Rat   482 ILDVNISSLW-TLARAQEPSMGSDFLKAVE--------TLVHSVSPQQHPFSFSSSNVLLQSQLL 537

  Fly   578 ETKTIQSSVVFPDSDQWPLSSDRIE--LP---RAALIDNSEGGLVRIVFAAFDRLESILKPSYDH 637
            ...:       |...|.|.:...::  :|   .|.|:.|  |..|||...|..:|:|.|..:|  
  Rat   538 RHSS-------PLGYQMPSAPPLLQARIPWHSLAPLVLN--GTNVRITSLALQKLDSRLPSNY-- 591

  Fly   638 FDLKSSRSYVRNT-----------AILSNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQLSQP 691
                  |..:|:|           :|.::..|....|:     |::.:.::.:|           
  Rat   592 ------RQGLRDTSYATPGMILVISITADGQDFTQAEV-----IMDFEDMNGTL----------- 634

  Fly   692 ITLTLKHLKTENVTNPTCVFWNYIDH-------AWSANGCSLESTNRTHSVCSCNHLTNFAILMD 749
                  |          ||||   ||       .||..||.|::.|.:...|.|.|||.|:|||.
  Rat   635 ------H----------CVFW---DHNAFQGRGGWSDEGCELQAANASAVQCVCRHLTAFSILMS 680

  Fly   750 VVDEHQHSLFTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGVFVKS-----ARTSIYTSIYL 809
                 ||::  ..|..:.:...:.:|..::.:::.|:..:|...|.|::     ..|:::..: :
  Rat   681 -----QHAV--PEDPLLDLLSQVGVGASILALLVCLVIYRLVWRVVVRNKVAFFRHTALFNMV-I 737

  Fly   810 CLLAIELLFLLG--IEQTETSIFCGFITIFL-HCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQ 871
            |||..:..||..  :.....|:.| ..|.|| |...|:...|...:|.     :.:.:||....|
  Rat   738 CLLVADTCFLGNPWLPSGYHSLVC-LATAFLCHFFYLATFFWMLAQAL-----VLAHQLLFVFHQ 796

  Fly   872 TPK---VNCYYLLSY--GLSLSVVAISLVIDPSTYTQNDYCVLMEANALFYATFVIPVLVFFVAA 931
            ..|   ::...:|.|  .|..:.|.:.|.:....|.:...|:|.......:| |..|||. .|:.
  Rat   797 LSKPLVLSMMSILGYLCPLGFAGVTLGLYLPQRKYLREGKCLLSGDGVSLHA-FSEPVLA-IVSV 859

  Fly   932 IGYTFLSWII-MCRKSRT-GLKTKEHTRLASVRFDIRCSFVFLLLLSAVWCSAYFYLRGAKMDDD 994
            .|...:..:: :.|.|.: |...::...|..|   ::...:...:....|......|....:   
  Rat   860 NGLVLVIAVLKLLRPSLSEGPAVEKRQALVGV---LKALLILTPIFGLTWGLGVTTLFEGSL--- 918

  Fly   995 TADVYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKCLRCSKTSISSGIVTGNG 1059
               |:.|.|:..|:|.|::||||.|:.::|:....||::|..       |.|.::||  :||...
  Rat   919 ---VFHYIFVILNSLQGVFIFVFGCLTDKKVLEALRKWLRGS-------RSSNSAIS--MVTNES 971

  Fly  1060 PTA 1062
            .|:
  Rat   972 CTS 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137 48/251 (19%)
GPS 705..752 CDD:197639 21/53 (40%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 61/286 (21%)
TM helix 1 765..790 CDD:320557 2/24 (8%)
TM helix 2 801..823 CDD:320557 6/23 (26%)
TM helix 3 832..859 CDD:320557 7/27 (26%)
TM helix 4 875..895 CDD:320557 4/21 (19%)
TM helix 5 913..942 CDD:320557 7/29 (24%)
TM helix 6 960..987 CDD:320557 2/26 (8%)
TM helix 7 997..1022 CDD:320557 11/24 (46%)
Herpes_TAF50 <1219..1365 CDD:308764
Adgrf3NP_001401841.1 HRM 353..>395 CDD:413313 13/84 (15%)
GPS 632..679 CDD:197639 21/76 (28%)
7tm_GPCRs 688..952 CDD:475119 58/281 (21%)
TM helix 1 690..714 CDD:320381 2/23 (9%)
TM helix 2 729..750 CDD:320381 6/21 (29%)
TM helix 3 762..784 CDD:320381 6/21 (29%)
TM helix 4 805..821 CDD:320381 3/15 (20%)
TM helix 5 842..865 CDD:320381 7/24 (29%)
TM helix 6 892..914 CDD:320381 1/21 (5%)
TM helix 7 918..943 CDD:320381 11/30 (37%)
Blue background indicates that the domain is not in the aligned region.

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