DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cirl and Adgrg3

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_038954076.1 Gene:Adgrg3 / 291854 RGDID:1305674 Length:574 Species:Rattus norvegicus


Alignment Length:538 Identity:126/538 - (23%)
Similarity:199/538 - (36%) Gaps:92/538 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   531 NPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSSVVFPDSDQWP 595
            |||:...|. .|....|||.|.|:|.........|...|      ..|...:|...:..:|....
  Rat    54 NPEEPRNVC-RLKEDYEYNTFDLSDIAQCFTKCGQSDTN------SCEVGNLQRYWLNYESHLLE 111

  Fly   596 LSSDRIELPRA-ALIDN-----SEGGLVRIVFAAFDR---------LESILKPSYDHFDLKSSRS 645
            .|.:.:::|.. |||.|     ||..|..:|.:...|         .:.:..|......|..:||
  Rat   112 NSMETVDMPFVKALIQNISTDVSEDLLYSLVPSQIPRQVMRGEDQPADRVRLPKSLFGALPGNRS 176

  Fly   646 YVRNTAILSNDSDVNAGEIQQRLR--------ILNSKVISASLGKGRHIQLSQPITLTLKHLKTE 702
            .||....:.|   :..|.:.:..|        :||::::..|:|:.....||:|:.:|..|....
  Rat   177 AVRLAITILN---IGPGNVFKGPRLLEDKGSSVLNNRMVGLSVGQMHATGLSEPVEITFSHQHQS 238

  Fly   703 NVTNPTCVFWNYIDHAWSANGCSLE-STNRTHSVCSCNHLTNFAILM-DVVDEHQHSLFTMFDGN 765
            .....|||||:.....|.::|||.| ...||  ||.|:|||.||:|: ..:|:......|.....
  Rat   239 PNVILTCVFWDMAKGDWDSHGCSTEPGDGRT--VCRCDHLTFFALLLRPTLDQATARTLTRISQA 301

  Fly   766 MRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQTETS-- 828
            ......|.:...:|..|....:|:.|..........::.||::|    :.|.||:.:......  
  Rat   302 GSAVSMIFLAFTMVLYVAFRFSLQRFKSEDAPKIHMALSTSLFL----LNLTFLINVGSGSQGPP 362

  Fly   829 IFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNCYY--------LLSYGL 885
            ..|.......|..:|....|...||||.|.      |:::|     .|.|:        ||.:||
  Rat   363 ASCWVRAAIFHYFLLCVFTWMGLEAFHLYL------LVIKV-----FNTYFGHYFLKLSLLGWGL 416

  Fly   886 SLSVV---------AISLVIDPSTYTQNDYCVLMEANALFYATFVIPVLVFFVAAIGYTFLSWII 941
            .:.:|         .:..:.|....|..:.|...:..||:.......::.|...|:....::|.|
  Rat   417 PVLIVIGVGSSNSYGVYTIRDQENRTSLELCWFQKEPALYATVHGYFLVTFLFGAVVLAMVAWKI 481

  Fly   942 MCRKSRTGLKTKEHTRLASVRFDIRCSFVFLLLLSAV----WCSAYFYLRGAKMDDDTADVYGYC 1002
            ....|.|..|.:..|..         |.:.:|.||::    |..|.....|...        .|.
  Rat   482 FTLPSVTAGKGQGQTWK---------SVLTVLGLSSLVGMTWGLAVLTPLGLST--------VYI 529

  Fly  1003 FICFNTLLGLYIFVFHCI 1020
            |...|:|.||:||.:..|
  Rat   530 FTLLNSLQGLFIFCWFII 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 38/171 (22%)
GPS 705..752 CDD:197639 21/48 (44%)
7tm_4 763..1014 CDD:304433 55/273 (20%)
Adgrg3XP_038954076.1 GPS 244..282 CDD:396408 20/39 (51%)
7tm_GPCRs 292..551 CDD:421689 59/288 (20%)
TM helix 1 294..319 CDD:410628 3/24 (13%)
TM helix 2 333..355 CDD:410628 6/25 (24%)
TM helix 3 366..393 CDD:410628 8/32 (25%)
TM helix 4 406..426 CDD:410628 5/19 (26%)
TM helix 5 454..481 CDD:410628 5/26 (19%)
TM helix 6 495..522 CDD:410628 7/35 (20%)
TM helix 7 524..549 CDD:410628 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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