DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and Adgrd1

DIOPT Version :10

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001074811.1 Gene:Adgrd1 / 243277 MGIID:3041203 Length:903 Species:Mus musculus


Alignment Length:872 Identity:204/872 - (23%)
Similarity:333/872 - (38%) Gaps:231/872 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 GGSG-----TDDGTLLTTKSSPNRPPG----------TAASGSVVPGNGSVVRTINNINLNAAGM 319
            ||.|     |.|.: :|.|::.| |||          .:..|..|..||:              :
Mouse   172 GGKGSVELYTRDNS-MTWKATFN-PPGPYWTHVLFTWKSKEGLKVYVNGT--------------L 220

  Fly   320 SGGDDESKLFCGPTHARNLYWNMTRVGDVNVQPCPGGAAGIAKWRCVLMKRIPDSGYDEY----- 379
            |..|...|:    :|.         .||.:|....|....       ..||..:..:||:     
Mouse   221 STSDPSGKV----SHT---------YGDPHVNLVIGSEQD-------QTKRYENGAFDEFIIWER 265

  Fly   380 ---DDDISSTTPAPSGGDCLHNSSSCEPPVSMAHKVNQRLRNFEPT--WHPATPDLTQCRSLWLN 439
               .|:|.....|..|...|  .||..|.:..||.|       .||  :||...:||:       
Mouse   266 ALTPDEIKMYFTAAIGKHAL--LSSTPPAMPTAHTV-------IPTDAYHPIITNLTE------- 314

  Fly   440 NLEMRVNQRDSSLISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSEKMMHDKETFPDQRQREAMI 504
              |.:..||..:::                        :.:|.||.::       |::...|...
Mouse   315 --ERKRFQRPGTVL------------------------RYLQNVSLRL-------PNKSLSEETA 346

  Fly   505 MELLHCVVKT-GSNLLDESQLSSWLDLNPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQKVK 568
            :.|....::| |..||    |.||...:.::.|.:.             |.|||   .:|:..:.
Mouse   347 LNLTETFLRTVGEVLL----LPSWTHESEDNAMTLG-------------LVDTI---DTVMGHIS 391

  Fly   569 NILLSVRVLETKTIQSSV-------VFPDSDQWPLSSDR----------IELPRAALIDNSEGGL 616
            :.|.|.....|.|..||.       |.|.:    ||:..          ||:||.||...:...:
Mouse   392 SNLQSREPHVTLTGSSSTAEFTVAKVLPPA----LSAPHYRFPAHGHSYIEIPREALHSQAWTTI 452

  Fly   617 VRIVFAAFDRLESILKPSYDHFDLKSSRSYVRNTAILSND--SDVNAGEIQQRLRILNSKVISAS 679
            |.:::...            |:       |::|....|.:  ..||..:.   |..:.|.:||..
Mouse   453 VGLLYHTM------------HY-------YLKNIHPTSTEIPEAVNCRDC---LLSVASHLISLE 495

  Fly   680 LGK----GRHIQLSQPITLTLKHLKTE----NVTNPT------CVFWNYI--DHAWSANGCSLES 728
            :..    .:::..|..||:.|:|..|:    :.||.:      |.|.|:.  :..||:.||:|..
Mouse   496 VSPPPTLSQNLSGSPLITVHLRHKLTQKQYSDATNESNRLFLYCAFLNFSSGEGVWSSQGCALTE 560

  Fly   729 TNRTHSVCSCNHLTNFAILMDVVD---EHQHSLFTMFDGNMRIFIYISIGICVVFIVIALLTLKL 790
            .|.|:|||.|.|||||||||.||.   .|.|.:      .:....|:...:.|:.:...|:|..:
Mouse   561 GNLTYSVCHCTHLTNFAILMQVVPLKLTHGHQV------ALSSISYVGCSLSVLCLAATLVTFAV 619

  Fly   791 FNGV-FVKSARTSIYTSIYLCLLAIELLFLLGIEQTETSIFCGFITIFLHCAILSGTAWFCYEAF 854
            .:.| .:::.|..|:.::...:|..::|.|:.......::.|..:.:.||...|:..||...|..
Mouse   620 LSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFSMEPGTVPCQVLAVLLHYFFLTAFAWMLVEGL 684

  Fly   855 HSYSTLTSDELLLEV--DQTPKVNCYYLLSYGLSLSVVAISLVIDPSTYTQNDYCVLMEANALFY 917
            |.||      ::::|  .:..|...||.:.:|..|.:..||:.....:|..:|.|.|...:...:
Mouse   685 HLYS------MVIKVFGSEDSKHLYYYGIGWGCPLLICIISISSSMDSYGTSDSCWLALGSGAIW 743

  Fly   918 ATFVIPVLVFFVAAIGYTFLSWIIMCRKSR--TGLKT---KEHTRLASVRFDIRCSFVFLLLLSA 977
            | ||.|.|:..|..|       :|:...:|  :.:.|   |.|...::.:...:...|.|.:|..
Mouse   744 A-FVGPALLVIVVNI-------VILVAVTRVISHISTDSYKIHGDPSAFKLTAKAVAVLLPILGT 800

  Fly   978 VWCSAYFYLRGAKMDDDTADVYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKC 1042
            .|      :.|.....|.|.|:.|.|...|:|.||:||:|||:.|.::|..::...:..:.....
Mouse   801 SW------VFGVLAVSDRALVFQYMFAILNSLQGLFIFLFHCLLNSEVRAAFKHKTKVWSLTSSS 859

  Fly  1043 LRCSKTS-ISSGIVTGNGP-TAGTLCS 1067
            .|.:.|. .||..|.|..| ||.|..|
Mouse   860 ARTANTKPFSSDTVNGTRPGTASTKLS 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137 46/250 (18%)
GPS 705..752 CDD:197639 26/54 (48%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 65/279 (23%)
TM helix 1 765..790 CDD:320557 4/24 (17%)
TM helix 2 801..823 CDD:320557 4/21 (19%)
TM helix 3 832..859 CDD:320557 8/26 (31%)
TM helix 4 875..895 CDD:320557 6/19 (32%)
TM helix 5 913..942 CDD:320557 7/28 (25%)
TM helix 6 960..987 CDD:320557 4/26 (15%)
TM helix 7 997..1022 CDD:320557 12/24 (50%)
Herpes_TAF50 <1219..1365 CDD:308764
Adgrd1NP_001074811.1 Laminin_G_3 <199..273 CDD:463865 17/107 (16%)
GPS 537..584 CDD:197639 24/46 (52%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 539..586 25/46 (54%)
Stachel. /evidence=ECO:0000250|UniProtKB:Q6QNK2 575..583 6/7 (86%)
7tm_GPCRs 592..851 CDD:475119 65/284 (23%)
TM helix 1 595..619 CDD:410628 4/23 (17%)
TM helix 2 631..652 CDD:410628 4/20 (20%)
TM helix 3 662..684 CDD:410628 6/21 (29%)
TM helix 4 703..719 CDD:410628 4/15 (27%)
TM helix 5 738..761 CDD:410628 8/30 (27%)
TM helix 6 788..810 CDD:410628 5/27 (19%)
TM helix 7 814..839 CDD:410628 12/24 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 862..903 10/25 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.