DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and mth-2

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001364698.1 Gene:mth-2 / 173752 WormBaseID:WBGene00017947 Length:971 Species:Caenorhabditis elegans


Alignment Length:1157 Identity:203/1157 - (17%)
Similarity:368/1157 - (31%) Gaps:374/1157 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VEWSVNCMFPK------SLSVLNSRCAHKQ------SCGVLAATSMF------------------ 96
            :|:.||..|..      :.:|||....|.|      :||:|.....|                  
 Worm    41 MEFQVNVGFSNDGYAVFTTAVLNMTPYHFQMYVNGRNCGLLTLQCKFQLQPNESLNIVLDKIDMQ 105

  Fly    97 ----------GDPCPGTHKYLEAHYQ----CISAAQTSTTTNRPSPPPWVLSNGPPIFGNGSGLI 147
                      |...|..  |:...|:    |...:|.||.|.                    |.:
 Worm   106 SNLMTFTYRGGKKDPDV--YINGCYESMSSCAYGSQQSTDTR--------------------GTL 148

  Fly   148 HPPGVGAGAPPPPRLPTLPGVVGISGNPGLFNVPPQHTAVTH-----STPSSSTTAVGGGRLKGG 207
            :...:.|.....|..........||..| .:|..|...:.|.     |:.|.||:..........
 Worm   149 YQDSICACVGSFPTCLFSENDTCISNRP-FWNYDPPTASTTEEIDTSSSTSRSTSTPSSTEASST 212

  Fly   208 ATSTTTTKHPAGRHDGLPPPPQLHHHHNHHGEDTASPTKPSSKLPAGGNATSPSNTRILTGVGGS 272
            .|||||.:...                      |..||.|::        |:.::|..:|.:..|
 Worm   213 VTSTTTARTTT----------------------TMIPTTPTT--------TTIASTSTVTSIVTS 247

  Fly   273 GTDDGTLLTTKSSPNRPPGTAASGSVVPGNGSVVRTINNINLNAAGMSGGDDESKLFCGPTHARN 337
            .|...|.:.|.:.....|.|.|: |......|...|..:.:.:...::...:.:.....||.:  
 Worm   248 TTVTSTTVPTTTVVTTVPTTTAT-STSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTS-- 309

  Fly   338 LYWNMTRVGDVNVQPCPGGAAGIAKWRCVLMKRIPDS--GYDEYDDDISSTTPAPSGGDCLHNSS 400
                      ...:|.|...|.:.   ...:|.:.||  |.:.....::.|......|..|:.:.
 Worm   310 ----------PTPEPEPTTTATVL---APTLKNLSDSGVGINNVSTVLNETLTYSEMGANLNATQ 361

  Fly   401 SCEPPVSMAHKVNQRLRNFEPTWHPATPDLTQCRSL-WLNNLEMRVNQRDSSLISIANDMSEVTS 464
            ..|....:.:..|             .|.||...|: .|:||:..:....:.:....|....|.:
 Worm   362 VAEISTILINSAN-------------VPGLTAENSMAILHNLDNMLYVSPTIMYQSGNSAQGVLN 413

  Fly   465 SKTLYGGDMLVTTKIIQTVSEKMMHDKETFPDQRQREAMIMELLHCVVKTGSNL------LDESQ 523
            |         :.|.:..||            |||      :|.|:     |.||      ||.|.
 Worm   414 S---------LGTMVDNTV------------DQR------IEYLN-----GQNLGFSSKRLDCSN 446

  Fly   524 LSS---WLDLNPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSS 585
            |.:   .|||..:.::..:|..|.  ::::.|:.   :.:....|.:.::..::       .:.:
 Worm   447 LGADDGLLDLGSKFELINSTDSLG--KWHSILVP---LSDLCSTQDLSHVFFTI-------YRDT 499

  Fly   586 VVFPDSDQW--------PLSSDRIE-------LPRAALIDNSEGGLVRIVFAAFDRLESILKPSY 635
            .:|....|:        |:||...|       :||:|....:|                      
 Worm   500 SLFVGPQQYRTYTGTNKPISSGEAETYTPPPRVPRSAGFYEAE---------------------- 542

  Fly   636 DHFDLKSSRSYVRNTAILSNDSDVNAGEIQQRLRILNSKVISASL---GKGRHIQLSQPITLTLK 697
                     .|..|    :....|......::..:..:.|:||::   |....:..:...|:.|.
 Worm   543 ---------PYQMN----ATSQTVPLSPCARQTSLPPTPVMSATVMNNGVAVSVSATSEATMALL 594

  Fly   698 HLKTENVTNP-----TCVFWNYIDHAWSAN-GCSLESTNRTHSVCSCNHLTNFAILMDVVDEHQH 756
            ......:..|     ...:|:...:||:.: .|.:.|.:.......|.|||:|||::|.      
 Worm   595 RFNISTLMKPLHGNLKVTWWDIGRNAWAEDRQCEIVSESDGILEARCTHLTDFAIIVDA------ 653

  Fly   757 SLFTMFDGNMRIFIYISIGICVVFI-VIALLTLKLFN-GVFVKS-ARTSIYTSI----------- 807
               .:.|.|:.....|::|..|..: :::|..|..|: ..::.| |.:.:|:.:           
 Worm   654 ---ALNDPNVCDNALITLGYVVNGLSIVSLAFLTFFSISAYINSLANSRLYSYVRGHNLARRDFL 715

  Fly   808 ----YLCLLAIELLFLLGIEQTETSIFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLE 868
                :..||...:.|.:...|..:...|..:...::..:|.......::|..:         :|.
 Worm   716 ALIYHFDLLLFYVFFTVFSNQDVSGDMCTAMAAVMYALLLCSLFLTIFQALRN---------ILV 771

  Fly   869 VDQTPKVNCYYLLS--YG---LSLSVVAISLVI--------------DPSTYTQNDYCVLMEANA 914
            ...||   .|.||:  :|   :.::.||:..::              |...:.:.||.|      
 Worm   772 FLPTP---AYRLLNICFGTVPVLITSVALPFILSIFLLVFTKFFDRQDCFCWVRPDYIV------ 827

  Fly   915 LFYATFVIPVLVFFVAAIGYT-FLSWIIMCRKSRTGLKTKEH------TRLASVRFDIRCSFVFL 972
               |..:|||.|..::.:..| |:.:.:.|...|...:...|      |::.|:       .|..
 Worm   828 ---AAIIIPVTVLLLSTVVCTSFMIYKVFCGMKRKFSQGGHHYDPNVITKIVSI-------VVMQ 882

  Fly   973 LLLSAVWCSAYFYLRGAKMDDDTADVYGYCFICFNTLLG------LYIFVFHCIQNEKIRREYRK 1031
            :.|...|...:    |......|.    :....|..:||      |.||:               
 Worm   883 ISLGLPWILQF----GTLYSPYTT----FWHYTFTIVLGSQGTILLLIFL--------------- 924

  Fly  1032 YVRQHAWLPKCLRCSKTSISSGIVTGNGPTAGTLCSVSTSKKPKLPLGVSEE 1083
            |.|..||.      :.:::.|         .|...|.:::|:.||   |.||
 Worm   925 YKRYRAWQ------ADSTLKS---------RGQSYSKNSTKRTKL---VEEE 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328 17/94 (18%)
GAIN 453..680 CDD:293098 41/250 (16%)
GPS 705..752 CDD:197639 14/52 (27%)
7tm_4 763..1014 CDD:304433 52/300 (17%)
mth-2NP_001364698.1 GPS 607..656 CDD:197639 13/57 (23%)
7tm_GPCRs 662..933 CDD:421689 56/327 (17%)
TM helix 1 664..690 CDD:410628 6/25 (24%)
TM helix 2 706..735 CDD:410628 3/28 (11%)
TM helix 4 779..803 CDD:410628 5/23 (22%)
TM helix 5 824..852 CDD:410628 10/36 (28%)
TM helix 6 868..897 CDD:410628 6/39 (15%)
TM helix 7 902..927 CDD:410628 7/43 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158951
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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