DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and Adgrg1

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_006530743.1 Gene:Adgrg1 / 14766 MGIID:1340051 Length:718 Species:Mus musculus


Alignment Length:759 Identity:166/759 - (21%)
Similarity:272/759 - (35%) Gaps:191/759 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 SGGDDESKLFCGPTHARNLYWNMTRVGDVNVQPCPGGAAGIAKWRC--VLMKRIPDSGYDEYDDD 382
            ||...|...|||   .||.....|...|.:.:|      .|..|..  .|..|.|...    ..|
Mouse    56 SGSPREDFRFCG---QRNQTQQSTLHYDQSSEP------HIFVWNTEETLTIRAPFLA----APD 107

  Fly   383 ISSTTPAPSG--GDCLHNS-----------------SSCEPPVSMAHKVNQRLRNFEPTWHPATP 428
            |....|.|.|  ..||:.|                 ||....:....|..|.|:.       ..|
Mouse   108 IPRFFPEPRGLYHFCLYWSRHTGRLHLRYGKHDYLLSSQASRLLCFQKQEQSLKQ-------GAP 165

  Fly   429 DLTQCRSLWLNNLEMRVNQRDSSLISIANDMSEVTSSKTLYGGDMLVTTKIIQTVSEKMMHDKET 493
            .:....|.|.......:....|.:.|..|...:|:.:.::   ||....|.:|.:|..:.|.::.
Mouse   166 LIATSVSSWQIPQNTSLPGAPSFIFSFHNAPHKVSHNASV---DMCDLKKELQQLSRYLQHPQKA 227

  Fly   494 FPDQRQREAMIMELLHCVVKTGSNLLDESQLSSWLDLNPEDQMRVATSLLTGLEYNAFLLADTII 558
              .:|...|.|.:.|..:         ||:|:|                       ...|.||:.
Mouse   228 --AKRPTAAFISQQLQSL---------ESKLTS-----------------------VSFLGDTLS 258

  Fly   559 RERSVVQKVKNILLSVRVLETKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNSEGGLVRIVFAA 623
            .|...|......|.....||...|.|.   .:.:|..:.:..:.||| |:...:.|       ..
Mouse   259 FEEDRVNATVWKLPPTAGLEDLHIHSQ---KEEEQSEVQAYSLLLPR-AVFQQTRG-------RR 312

  Fly   624 FDRLESILKPSYDHFDLKSSRSYVRNTAILSNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQL 688
            .|..:.:|...:      ||::..:         |.|:.:      :|..||:...:...:...|
Mouse   313 RDDAKRLLVVDF------SSQALFQ---------DKNSSQ------VLGEKVLGIVVQNTKVTNL 356

  Fly   689 SQPITLTLKHL-KTENVTNPTCVFW-----NYIDHAWSANGCSLESTNR-THSVCSCNHLTNFAI 746
            |.|:.||.:|. :.:||| ..||||     :....:||:.||  |:.:| |.:.|.|||||.||:
Mouse   357 SDPVVLTFQHQPQPKNVT-LQCVFWVEDPASSSTGSWSSAGC--ETVSRDTQTSCLCNHLTYFAV 418

  Fly   747 LM----DVVDEHQHSLFTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTS----- 802
            ||    :|...|:|.|        .:..|:.   ||:..:..:.|:    ..::.|.|.|     
Mouse   419 LMVSSTEVEATHKHYL--------TLLSYVG---CVISALACVFTI----AAYLCSRRKSRDYTI 468

  Fly   803 -IYTSIYLCLLAIELLFLLG--IEQTETSIFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDE 864
             ::.::...:..:::.|||.  :..|.:...|....:|||.::|:..:|...|.::.|      .
Mouse   469 KVHMNLLSAVFLLDVSFLLSEPVALTGSEAACRTSAMFLHFSLLACLSWMGLEGYNLY------R 527

  Fly   865 LLLEVDQTPKVNCYYLLSYGLSLSVVA-------ISLV--IDPSTYTQNDYCVLMEANALFYAT- 919
            |::||..|      |:..|.|.||:|.       ::||  :|.:.|......|......:.|.: 
Mouse   528 LVVEVFGT------YVPGYLLKLSIVGWGFPVFLVTLVALVDVNNYGPIILAVRRTPERVTYPSM 586

  Fly   920 -FVIPVLVFFVAAIGYTFLSWIIMCRKSRTG----LKTKEHTRLASVRFDIRCSFVFLLL-LSAV 978
             ::...||.:|..:|...|.::.......|.    |:.:.|::        ....|..|| ||.|
Mouse   587 CWIRDSLVSYVTNLGLFSLVFLFNLAMLATMVVQILRLRPHSQ--------NWPHVLTLLGLSLV 643

  Fly   979 ----WCSAYFYLRGAKMDDDTADVYGYCFICFNTLLGLYIFVFH 1018
                |...:|........    .|..|.|....:..|..||:::
Mouse   644 LGLPWALVFFSFASGTFQ----LVILYLFSIITSFQGFLIFLWY 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 42/226 (19%)
GPS 705..752 CDD:197639 23/56 (41%)
7tm_4 763..1014 CDD:304433 55/278 (20%)
Adgrg1XP_006530743.1 PLL 60..193 CDD:376013 32/152 (21%)
GAIN_A 204..251 CDD:376045 14/83 (17%)
GPS 376..419 CDD:366827 19/44 (43%)
7tm_GPCRs 431..698 CDD:391938 59/292 (20%)
TM helix 1 433..458 CDD:341315 5/39 (13%)
TM helix 2 468..490 CDD:341315 3/21 (14%)
TM helix 3 501..528 CDD:341315 7/32 (22%)
TM helix 4 541..561 CDD:341315 6/19 (32%)
TM helix 5 592..621 CDD:341315 6/28 (21%)
TM helix 6 629..656 CDD:341315 8/34 (24%)
TM helix 7 662..687 CDD:341315 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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