DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and adgrf11

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_005160858.1 Gene:adgrf11 / 100537132 ZFINID:ZDB-GENE-121214-165 Length:691 Species:Danio rerio


Alignment Length:749 Identity:151/749 - (20%)
Similarity:267/749 - (35%) Gaps:211/749 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 NMTRVGDVNVQPCPGGAAGIAKWRCVLMKRIPDSGYDEYDDDISSTTPAPSGGD----CLHNSSS 401
            |..|.....||.|||...|            |...::.|.|  .:......||.    |..::..
Zfish    33 NHIRERSTGVQECPGLING------------PRDHFNCYKD--GTLENGQKGGQLNRTCGKHNEG 83

  Fly   402 CEPPVSMAHKVNQRLRNFEPTWHPATPDLTQ-----CRSLWLNNLEMRVNQRDSSLISIANDMSE 461
            |:          ..|.:.:|......|.:.:     .::|::.::...|.|..:   :.|....|
Zfish    84 CQ----------YGLGSSKPILDDRVPQVIEDLQRKAQALFVWDMPEFVAQLST---ATAQHHEE 135

  Fly   462 VTSSKTLYGGDMLVTTKIIQTVSEKMMHDKE-----TFPDQRQREAMIMELLHCVVKTGSNLLDE 521
            :|.|           ...:||:.:.::|..|     ||   |:.|      :..:::|...|:.:
Zfish   136 ITES-----------AATVQTMVKILVHIAEISQNITF---RKPE------MENILQTVDILVSK 180

  Fly   522 SQLSSWLDLNPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQKVKNILLSVRVLETKTIQSSV 586
            ....:|..|| ..:|.|.||:                   |::..|::|...:            
Zfish   181 KSRRTWEKLN-NSKMTVNTSI-------------------SLLGAVEDICSRL------------ 213

  Fly   587 VFPDSDQWPLSSDRIELPRAALIDNSEGGLVRIVFAAFDRL-ESILKP-SYDHFDLKSSRSYV-- 647
               ..|.:.::...|||.. .:|:||..|...:..:..:.| :.:||| |.....|.:..|.:  
Zfish   214 ---THDSFVINKTSIELIN-TVIENSYSGKSHLPNSTTEILIQQVLKPTSLTIIILTTLHSILPA 274

  Fly   648 RNTAILSNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQLSQPITLTLKHLK------TENVTN 706
            |.||......||.          :|..|:...:.:            ||:::.      .:::.|
Zfish   275 RYTANGKGKPDVR----------INGDVVVVKVNQ------------TLQNISFVFDTTEQSLGN 317

  Fly   707 PTCVFWNYIDHAWSANGCSL-----ESTNRTHSVCSCNHLTNFAILMDVVDEHQHSLFTMFDGNM 766
            |.|||||:....|.:.||.:     |........|.|||.|:|::||        |.|.:.|..:
Zfish   318 PQCVFWNFHLSTWDSTGCEVKPNLSEEEKIDKITCECNHTTSFSLLM--------SPFFIDDKAL 374

  Fly   767 RIFIYISIGICVVFIVIALL-------TLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIEQ 824
            ....|..:||.|:.:||:|:       |:...|..:::.. ..:.|::  .||..::.|::|...
Zfish   375 DYITYTGLGISVLSLVISLIIGAIVWTTVTKSNSAYLRHV-CLVNTNV--SLLVADVCFIIGASI 436

  Fly   825 TETSIF-----CGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLL--------EVDQTPKVN 876
            .:....     |..:...:|...|:...|.          |.|..|||        ::.:...:.
Zfish   437 VQPGQLAPVGPCTAVAFSMHLFFLAFFFWM----------LISAMLLLYMTTMVYSQMSRAKMMA 491

  Fly   877 CYYLLSYGLSLSVVAISLVIDPSTY--TQNDYCVLMEANALFYATFVIPVLVFFVA-AIGYTFLS 938
            ..:.|.||..|.:|.|       ||  |..:...::||:..:........|..||: |..:|.::
Zfish   492 IAFFLGYGAPLLIVVI-------TYGLTAREGKYILEADVCWLNFDETKALQIFVSLASSFTAVN 549

  Fly   939 WII---------MCRKSRTGLKTKEHTRLASVRFDIRCSFVFLLLLSAVWCSAYFYLRGAKMDDD 994
            .:|         :.||.    :.||...|.:|   .|...:...|....|....    |..:..|
Zfish   550 VLIIIVVLYKMLIVRKQ----QNKETNILPTV---TRVVLIVSPLFGVTWGLGI----GTMLSPD 603

  Fly   995 TADVYG--YCFICFNTLLGLYIFVFHCIQNEKIR 1026
                ||  ..|...|:|.|::..|...:.|.::|
Zfish   604 ----YGIHLVFTILNSLQGIFNLVSGLLVNSQVR 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 46/235 (20%)
GPS 705..752 CDD:197639 19/51 (37%)
7tm_4 763..1014 CDD:304433 58/284 (20%)
adgrf11XP_005160858.1 GAIN 143..>227 CDD:293098 22/127 (17%)
GPS 318..363 CDD:280071 16/44 (36%)
7tm_4 374..620 CDD:304433 57/280 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.