DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and LOC100536657

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_005171094.1 Gene:LOC100536657 / 100536657 -ID:- Length:761 Species:Danio rerio


Alignment Length:844 Identity:188/844 - (22%)
Similarity:323/844 - (38%) Gaps:186/844 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 RTINNIN-LNAAGMSGGDDESKLFCGPTHARNLYW-----------------------------N 341
            ||..::| .:.||:.|.:.    .|..||..  |:                             |
Zfish    30 RTCVDVNECDTAGVCGNNS----LCINTHGS--YYCTCIEGFYSTPPNFTADTGQCEDINECVQN 88

  Fly   342 MTRV-GDVNVQPCPGGAAGIAKWRCVLMKRIPDSGYDEYDDDISSTTPAPSGGDCLHNSSS---- 401
            :||. ||:..:...|      .::||......::..|....|....:|......|.:...|    
Zfish    89 VTRCSGDMECKNIDG------SYKCVCKDGYRETRLDSACADECVFSPCGLHSSCFNTLGSFFCN 147

  Fly   402 CEPPVSMAHKVNQRLRNFEPTWHPATPDLTQCRSLWLNNLEMRVNQRDSSLISIAND-MSEVTSS 465
            |.             ..||...:....|:.:|..      :..:..::|...:|... :.:....
Zfish   148 CS-------------SGFEKLENGTCGDIDECTD------KSHICDKNSECNNIPGSYICKCHRG 193

  Fly   466 KTLYGGDMLVTTKIIQTVSEKMMHDKETFPDQRQREAMIMELLHCVVKTGSNLLDESQLSSWLDL 530
            .|.||.:.   :|.|:.       :.:.|..:.:.|.|.::|        ..||.:.:.|....:
Zfish   194 FTNYGNNQ---SKCIEM-------NCDNFKTETEAEEMPIKL--------KELLSQLRSSCEALV 240

  Fly   531 NPEDQMRVATSLLTGLEYNAFLLADTIIRERSVVQ-KVKNILL-----SVRV-----------LE 578
            .|:.:.:....|:.    |.|...|.::...||.. :..::||     |:|:           :|
Zfish   241 TPDGERKTGEQLME----NLFTSTDDLLSAGSVGDGETLSVLLDTVENSMRLICPQLKEPVMRME 301

  Fly   579 TKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNSEGGLVRIVFAAFDRLESILKPSYDHF----- 638
            |....:.|.. ..:|.|.|...|....:||.:.|              .|:::..||..|     
Zfish   302 THNTYAEVAV-TRNQTPPSGSVILSTGSALFNTS--------------WETVVGKSYPGFAFVSL 351

  Fly   639 ----DLKSSRSYVRNTAILSNDSDVNAGEIQQRLRILNSKVISASLGKGRHIQLSQPITLTLKHL 699
                |:.||.:..||.:...:|.:.|.      ...|||||::..:.......||:|::|...|:
Zfish   352 VSYKDMNSSSNLFRNVSRKKSDMEENV------THKLNSKVVTVVVSNPDTKHLSEPVSLIFTHV 410

  Fly   700 KTENVTNP---TCVFWNYIDHAWSANGCSLESTNRTHSVCSCNHLTNFAILMD---VVDEHQHSL 758
            :....:..   .||:|...:.|||..||....:|.||:.|||:||::||:||.   |.|..:..|
Zfish   411 EERAESKAVAYNCVYWAESERAWSRQGCERAWSNSTHTECSCSHLSSFAVLMSLYPVQDTFELVL 475

  Fly   759 FTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLCLLAIELLFLLGIE 823
            .|      |:.:.:|: :|   :.:.:||.:....  ::..|.||:..:.:||...:|:||.||.
Zfish   476 IT------RVGLVLSL-LC---LFLCILTFRFCRS--IQGTRNSIHLHLSVCLFIADLVFLCGIS 528

  Fly   824 QTETSIFCGFITIFLHCAILSGTAWFCYEAFHSYSTLTSDELLLEVDQTPKVNCY-YLLSYGLSL 887
            .|...:.|..:...||...||...|...|....|      .:::.|..|...:.| |.:.||:.|
Zfish   529 STHNQVACAIVAGLLHFFFLSAFCWMLLEGVQLY------RMVVLVFHTTLKHLYMYAVGYGVPL 587

  Fly   888 SVVAISLVIDPSTYTQNDYCVLMEANALFYATFVIPVLVFFVAAIGYTFLSWIIMCRK--SRTGL 950
            .:|:||.:..|..|..:.:|.| .....|..:|:.||.:.    ||...|.::|...|  .:...
Zfish   588 VIVSISAIAFPKGYGTDRHCWL-SLKYDFIWSFLAPVCLI----IGLNSLVFVITVWKLAEKFSS 647

  Fly   951 KTKEHTRLASVRFDIRCSFVFLLLLSAVWC--SAYFYLRGAKMDDDTADVYGYCFICFNTLLGLY 1013
            ...:.::|.::|.....:...|.:|..:|.  |..||       :....|..|.|:..|:|.|..
Zfish   648 LNPDLSKLRTIRGFTVTAVAQLCVLGGMWIFGSFLFY-------EKVTQVALYLFVILNSLQGAL 705

  Fly  1014 IFVFHCIQNEKIRREYRKYVRQHAWLPKCLRCS-KTSISSGIVTGNGPTAGTLCSVSTSKKPKL 1076
            ||:.||:.:.::|.||.|.:.:        .|| |....|...|.|..:...|.|..||.:.|:
Zfish   706 IFIMHCLLSRQVREEYCKLITR--------ICSLKKKKYSEFSTSNHSSQQPLRSDQTSGESKI 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328
GAIN 453..680 CDD:293098 50/253 (20%)
GPS 705..752 CDD:197639 21/52 (40%)
7tm_4 763..1014 CDD:304433 61/255 (24%)
LOC100536657XP_005171094.1 EGF_CA 34..67 CDD:214542 8/38 (21%)
EGF_CA 81..122 CDD:284955 9/46 (20%)
EGF_CA 124..153 CDD:214542 5/41 (12%)
EGF_CA 162..196 CDD:214542 4/39 (10%)
GPS 422..467 CDD:197639 20/44 (45%)
7tm_4 473..706 CDD:304433 63/262 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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