DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cirl and LOC100536038

DIOPT Version :9

Sequence 1:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster
Sequence 2:XP_021323826.1 Gene:LOC100536038 / 100536038 -ID:- Length:234 Species:Danio rerio


Alignment Length:111 Identity:33/111 - (29%)
Similarity:57/111 - (51%) Gaps:5/111 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LSISYEHISLDLSKYQTAYACEGKKLTIECDPGDVINLIRANYGRFSITIC--NDHGNVEWSVNC 68
            ||::|..:..::   :::..||......:|:.|.:|::..|||||...:.|  ....:.....||
Zfish   121 LSVTYYCLPPEI---RSSAVCENAIANFKCEDGSLIHIHAANYGRTDSSTCAAGRPASQTAKTNC 182

  Fly    69 MFPKSLSVLNSRCAHKQSCGVLAATSMFGDPCPGTHKYLEAHYQCI 114
            ....|.:::.:.|..|.||.:.|:..:|.|||.||:|||...|.|:
Zfish   183 YASNSQTLVANVCEGKNSCSISASNGVFSDPCYGTYKYLYTAYSCV 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CirlNP_001260807.1 Gal_Lectin 33..113 CDD:280328 27/81 (33%)
GAIN 453..680 CDD:293098
GPS 705..752 CDD:197639
7tm_4 763..1014 CDD:304433
LOC100536038XP_021323826.1 Gal_Lectin 48..127 CDD:307994 3/5 (60%)
Gal_Lectin 146..227 CDD:307994 27/80 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4729
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.