DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8642 and Fibcd1

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_849218.2 Gene:Fibcd1 / 98970 MGIID:2138953 Length:459 Species:Mus musculus


Alignment Length:389 Identity:121/389 - (31%)
Similarity:177/389 - (45%) Gaps:72/389 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 AESAATIKDKENEINKLQTKDQTGDELLRKFENLTQVCSAQQSSFTTAIKEKDEQ---------I 142
            |.||....::.:..:.....|....:|...|..|..:    |:|...|:.|...|         :
Mouse    75 ANSALVTVERADSSHLSLLIDPRCPDLTDSFARLEGI----QASILRALSEHQAQPRLDGAPELL 135

  Fly   143 KELEQKVKVYETRLKRKQHVLAELRK---LNGSSALLIEHLKGKVV------------------- 185
            ..|..::....||....|...|.|||   |.|.....::..:|:::                   
Mouse   136 DALADQLPRLLTRASELQAECAGLRKGHSLLGQGLSTLQSEQGRLIQLLSESQGHMAHLVNSVSD 200

  Fly   186 YFERKFREK---KDDLLADWEAATT------SCVPFGR-------------SPGIHLI---HLPG 225
            ..|...||:   :..:.||.:.|.:      .|....|             ..|::.|   |.|.
Mouse   201 VLEALQRERGLGRPRVKADLQRAPSRGARPRGCANGSRPRDCLDVLLSGQQDDGVYSIFPTHYPA 265

  Fly   226 FLPFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKLHRLTSSQPH 290
              .|.|.|:.:|..| |||..|||.||||||:|.|:||.:|||||.||.::||:::|.||:...:
Mouse   266 --GFQVYCDMRTDGG-GWTVFQRREDGSVNFFRGWEAYREGFGKLTGEHWLGLKRIHALTTQAAY 327

  Fly   291 ELYISIRRFGGETSYAHYDDFLIG-----SEEEGYELKLLGHYQGNASDALRTHDKMKFSTYDRD 350
            ||::.:..|...|:||||..|.:|     .||:||.| .:..|.|.|.|:|..|..|:|:|.|||
Mouse   328 ELHVDLEDFDNGTAYAHYGSFGVGLFSVDPEEDGYPL-TVADYSGTAGDSLLKHSGMRFTTKDRD 391

  Fly   351 NDAFTHMNCAEHHQGAWWYDFCSRSNLNGRYFKG-EVDNPQSIYWEPWYSFR-SLKSVQMLIRP 412
            :| .:..|||..::|||||..|..|||||:|.:| .......:.|..|..:: |||..:|.|||
Mouse   392 SD-HSENNCAAFYRGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIRP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 16/84 (19%)
FReD 213..413 CDD:238040 91/223 (41%)
Fibcd1NP_849218.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
FReD 239..455 CDD:238040 90/221 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3330
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H122246
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - otm43923
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3359
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.840

Return to query results.
Submit another query.