DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and fgb

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001107962.1 Gene:fgb / 594921 XenbaseID:XB-GENE-483216 Length:490 Species:Xenopus tropicalis


Alignment Length:470 Identity:123/470 - (26%)
Similarity:192/470 - (40%) Gaps:145/470 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TKAPVK-------EIPPTNG-----TQIGNVTAVAPVPEKLAEVHIDQHKTIRIS----KGDLDD 77
            ||||.|       |.|...|     .::|   .:.|...:|....:.|.:.::..    :|.::.
 Frog    76 TKAPAKAQKKEPTEYPDAGGCKHAYEELG---TLCPTGCELRTTLLKQERNVKTGISDVRGRVES 137

  Fly    78 L----------LDVYMGKIAESAATIKDKENEINK--LQTKDQTGDELLRKFENLTQVCSAQQSS 130
            |          .:|...|:.|:.....|.:|.||:  |:.::|                      
 Frog   138 LSQLTNNIYRYTNVLSQKMKETQQQALDNQNVINEYNLEVEEQ---------------------- 180

  Fly   131 FTTAIKEK-----DEQIKELEQKVKVYETRLKRKQHVLAELRKLNGSSALLIEHLKGKVVYFERK 190
             .|.|||.     ...|:.|.|.:          ::|.::::||..:.|..:|:.:...|     
 Frog   181 -YTFIKENIDNKIPSNIRTLRQVL----------ENVRSKIQKLEIAIATQVENCRSPCV----- 229

  Fly   191 FREKKDDLLADWEAATTSC-VPF-------------GRSPGIHLIHLPGFL-PFLVPCEGQTAAG 240
                            |:| :|.             |.:..::||....|. ||.|.|:..|..|
 Frog   230 ----------------TNCPIPVVSGKECEEIYRKGGETSEMYLIQPDSFFRPFKVYCDMATHDG 278

  Fly   241 PGWTCIQRRLDGSVNFYRNWDAYSKGFGK-----------LNGEFFIGLEKLHRLTSSQPHELYI 294
             |||.||.|.||||||.|.||:|..|||.           :.||:::|.||:.:||:....|..|
 Frog   279 -GWTVIQNRQDGSVNFGRTWDSYKSGFGNIAANGGKGICDMPGEYWLGNEKISQLTNLGATEALI 342

  Fly   295 SIRRFGGETSYAHYDDFLIGSEEEGYELKLLGHYQGNASDAL-----------RT---HDKMKFS 345
            .:..:.|....|.|..|.:.:|...|:|.:.| |:|.|.:||           ||   |:.|.||
 Frog   343 EMEDWDGAKVTAQYTGFTVQNEANKYQLSVSG-YKGTAGNALMEGASQLKGENRTMTIHNGMFFS 406

  Fly   346 TYDRDNDAFTHMN----CAEHHQGAWWYDFCSRSNLNGRYFKG--------EVDNPQSIYWEPWY 398
            |:|||||.:.|.:    |::...|.|||:.|..:|.||||:.|        :......:.|..|.
 Frog   407 TFDRDNDGWQHADPNKQCSKEDGGGWWYNRCHAANPNGRYYWGGYYTWDMAKHGTDDGVVWMNWK 471

  Fly   399 -SFRSLKSVQMLIRP 412
             |:.|:|::.:.|||
 Frog   472 DSWYSMKNMCIKIRP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 18/107 (17%)
FReD 213..413 CDD:238040 84/239 (35%)
fgbNP_001107962.1 Fib_alpha 93..235 CDD:285864 31/198 (16%)
FReD 238..487 CDD:294064 84/251 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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