DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and col11a2l

DIOPT Version :10

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001005799.1 Gene:col11a2l / 448277 XenbaseID:XB-GENE-12564499 Length:340 Species:Xenopus tropicalis


Alignment Length:202 Identity:84/202 - (41%)
Similarity:113/202 - (55%) Gaps:9/202 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 GIHLIHLPGFLPFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKL 281
            |.:.|:|.|..|..|.|:..|..| ||...|||:||||:|||:|.:|.:|||....||::|.|.:
 Frog   142 GWYTIYLDGNKPIKVLCDMDTDGG-GWIVFQRRVDGSVDFYRDWKSYKQGFGSQLSEFWLGNENI 205

  Fly   282 HRLTSSQPHELYISIRRFGGETSYAHYDDFLIGSEEEGYELKLLGHYQGNASDALRTHDKMKFST 346
            ||||||...:|...:..|....:||.|..|.:..|.:.|.|:......|.|.|:|.||....|||
 Frog   206 HRLTSSGNFQLRFDLEDFDNNRTYATYSQFRLEPESQNYTLRFREFTGGPAGDSLFTHKDRAFST 270

  Fly   347 YDRDNDAFTHMNCAEHHQGAWWYDFCSRSNLNGRYFKGEVDNPQ-SIYWEPWYSFR----SLKSV 406
            .|.|||..:..||||.::|||||:.|..|.|||.|.:|:.|... .::|.   .||    |||..
 Frog   271 KDADNDPASKTNCAERYKGAWWYESCYHSCLNGEYMRGQHDKADGGVHWA---KFRGVNYSLKVS 332

  Fly   407 QMLIRPK 413
            :|.:||:
 Frog   333 EMKLRPE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 MAD 71..>198 CDD:461677
FReD 213..413 CDD:238040 83/200 (42%)
col11a2lNP_001005799.1 Collagen 48..110 CDD:460189
FReD 128..338 CDD:238040 82/199 (41%)
Blue background indicates that the domain is not in the aligned region.

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