DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and tnr

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_919364.1 Gene:tnr / 369191 ZFINID:ZDB-GENE-030804-1 Length:1350 Species:Danio rerio


Alignment Length:409 Identity:127/409 - (31%)
Similarity:181/409 - (44%) Gaps:95/409 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VPSKIKS----TTKAPVKEIPPTNGTQIGNVTAVAPVPEKLAEVHIDQHKTIRIS----KGDLDD 77
            :||...|    .||.|:     |:||.|.|.......|:.|....|: |::..||    ..|:|:
Zfish  1005 IPSTTYSVALYATKGPL-----TSGTVISNFVTPMDAPQNLTASEIN-HRSALISWQPPIADIDN 1063

  Fly    78 LLDVYMGKIAESAATIKDKENEINKLQTKDQTGD-----ELLRKFENLTQVCSAQQSSFTTAIKE 137
            .:..|..........|.|.|:...:|:...:|.:     ::.|..|....|    .:||||.   
Zfish  1064 YMLTYKAADGSRKELILDAEDTWIRLEGLAETTEYTVRLQVARGLETSVIV----STSFTTG--- 1121

  Fly   138 KDEQIKELEQKVKVYETRLKRKQHVLAELRKLNGSSALLIEHLKG-KVVYFERKFREKKDDLLAD 201
                       .:::.|.....||:      |||      |.|.| ..:|..|       ||   
Zfish  1122 -----------NRLFPTPQNCAQHL------LNG------ETLGGIYTIYVNR-------DL--- 1153

  Fly   202 WEAATTSCVPFGRSPGIHLIHLPGFLPFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNWDAYSKG 266
                         |.|:.           |.|: .|..|.||...|||.:|..:|.|.|..|..|
Zfish  1154 -------------SQGVQ-----------VYCD-MTTDGGGWIVFQRRQNGLTDFSRKWTDYKIG 1193

  Fly   267 FGKLNGEFFIGLEKLHRLTSSQPHELYISIRRFGGETSYAHYDDFLIGSEEEGYELKLLGHYQGN 331
            ||.|..||::||:.:|::.:...:||.|.::. |.|:.||:||.|.||..:..|:|: :|.|.|.
Zfish  1194 FGSLEDEFWLGLDNIHKIAAQGRYELRIDMKD-GQESVYANYDRFSIGDSKSLYKLR-IGEYSGT 1256

  Fly   332 ASDALRTHDKMKFSTYDRDND-AFTHMNCAEHHQGAWWYDFCSRSNLNGRYFKGEVDNPQSIYWE 395
            |.|:|..|....|||.|:||| |.|  |||..::|||||..|.|:||||:|  ||..:.|.|.|.
Zfish  1257 AGDSLSYHQSRPFSTKDKDNDIAVT--NCALSYKGAWWYKNCHRANLNGKY--GESRHSQGINWY 1317

  Fly   396 PW--YSFRSLKSVQMLIRP 412
            .|  :.| |:..|:|.:||
Zfish  1318 HWKGHEF-SIPFVEMKMRP 1335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 18/95 (19%)
FReD 213..413 CDD:238040 82/203 (40%)
tnrNP_919364.1 EGF_2 199..225 CDD:285248
EB 234..283 CDD:279949
EGF_2 294..318 CDD:285248
fn3 323..401 CDD:278470
fn3 411..490 CDD:278470
fn3 500..579 CDD:278470
FN3 590..674 CDD:238020
fn3 682..754 CDD:278470
fn3 771..849 CDD:278470
FN3 859..935 CDD:214495
fn3 949..1019 CDD:278470 4/13 (31%)
fn3 1035..1103 CDD:278470 14/68 (21%)
FReD 1126..1336 CDD:238040 95/264 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - LDO PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

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