DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and CG5550

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster


Alignment Length:186 Identity:89/186 - (47%)
Similarity:109/186 - (58%) Gaps:10/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 TAAGPGWTCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKLHRLTSSQPHELYISIRRFGG 301
            |.||.||..:|||:....||||||.:|..|||.|.|.|||||..|::::|.||.||||.:..|.|
  Fly    66 TIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDFAG 130

  Fly   302 ETSYAHYDDFLIGSEEEGYELKLLGHYQGNASDALRTHDKMKFSTYDRDNDAFTHMNCAEHHQGA 366
            |..||||..|.:|:....|.:..||.|.|.|.|:|..|....|||:|||||..| :|||..:.||
  Fly   131 EKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNAT-INCAARYMGA 194

  Fly   367 WWYDFC-SR---SNLNGRYFKGEVDNP----QSIYWEPWYSFR-SLKSVQMLIRPK 413
            |||..| ||   |||||.|..|...:|    ..|.|..|..|. |.|:|.:::|||
  Fly   195 WWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRPK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352
FReD 213..413 CDD:238040 87/184 (47%)
CG5550NP_001246376.1 FReD 34..250 CDD:238040 87/184 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I3666
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D49112at7147
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - mtm6504
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
87.970

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