DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and sca

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster


Alignment Length:416 Identity:109/416 - (26%)
Similarity:184/416 - (44%) Gaps:90/416 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VPEKLAEVHIDQHKTIRISKGDLD----------------DLLDVYMGKIAESAATIKDKENEIN 101
            :.|::..:.::||   ||:..:.:                :||:...|...:...:|.:..:||:
  Fly   352 IDERVRSIEVEQH---RIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEIS 413

  Fly   102 KLQTKDQ--TGDELLRKFENLTQVCSAQQSSFTTAI-KEKDEQIKELEQKVKVYETRLKRKQHVL 163
            ||:..:.  |.::.|.:.|......|.|..:.:.:: :|:.|.:::|...|....|.:.|.|   
  Fly   414 KLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQ--- 475

  Fly   164 AELRKLNGSSALLIEHLKGKVVYFERKFRE----------KKDD----------LLADWEAATT- 207
                      :|:.:.:|.|:.:..:..:.          .:||          |:::.|...| 
  Fly   476 ----------SLVNDEMKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAETLVSELENVETQ 530

  Fly   208 -----SCVPFG------RSPGIHLIHLPGFL-PFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNW 260
                 :.:|..      ::.|:|||...|.. |.:..|     ...|||.:|||.|||.:|.|:|
  Fly   531 YEAIINKLPHDCSEVHTQTDGLHLIAPAGQRHPLMTHC-----TADGWTTVQRRFDGSADFNRSW 590

  Fly   261 DAYSKGFGKLNGEFFIGLEKLHRLTSSQPHELYISIRRFGGETSYAHYDDFLIGSEEEGYELKLL 325
            ..|::|||...|||:||.|:||.||......|.:.::........|.|..|.|.|..:||.|. :
  Fly   591 ADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLH-I 654

  Fly   326 GHYQGNASDALRTHDKMKFSTYDRDNDAFTHMNCAEHHQGAWWYDFCSRSNLNGRYFKGEVDNPQ 390
            ..|.|||||||.....|:||..|.|.| .:..:||.:::|.||:..|..:||||||..|      
  Fly   655 AEYSGNASDALNYQQGMQFSAIDDDRD-ISQTHCAANYEGGWWFSHCQHANLNGRYNLG------ 712

  Fly   391 SIYW-----EPWYSFRSLKSVQMLIR 411
             :.|     ..|.   ::||.:||::
  Fly   713 -LTWFDAARNEWI---AVKSSRMLVK 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 20/109 (18%)
FReD 213..413 CDD:238040 75/211 (36%)
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 76/214 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14151
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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