DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and tncb

DIOPT Version :10

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001299845.1 Gene:tncb / 30037 ZFINID:ZDB-GENE-980526-104 Length:1811 Species:Danio rerio


Alignment Length:384 Identity:121/384 - (31%)
Similarity:177/384 - (46%) Gaps:52/384 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AVAPVPEKLAEVHIDQHKTIRISKGDLDDLLDVYMGKI------AESAATIKDKENEI----NKL 103
            :||||.|:::      ..|:......|.. ..:|..|:      |:||||..|...::    |..
Zfish  1447 SVAPVMERVS------GNTVEFEMSSLTP-ATLYTVKVYAFRDTAKSAATSTDFTTDVDAPQNLA 1504

  Fly   104 QTKDQTGDELLRKFENLTQVCSAQQSSFTTAIKEKDEQIKE--LEQKVKVYE-TRLKRKQHVLAE 165
            .:..||...:|     ..:...|..|.:..:.:..|..:||  |......|. ::|........:
Zfish  1505 ASNIQTETAML-----TWKPPRADISGYILSFESADGVVKEVVLSPTATFYSMSQLTASTEYTVK 1564

  Fly   166 LRKLNG---SSALLIEHLKGKVVYFERKFREKKDDLLADWEAATTSCVPFGRSPGIHLIHLPG-- 225
            |:.:.|   |..:....|...|:|     :..||...|.....|||        |::.|:|.|  
Zfish  1565 LQAIAGPKRSRVISTVFLTIGVLY-----KHPKDCSQALLNGDTTS--------GLYTIYLRGDE 1616

  Fly   226 FLPFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKLHRLTSSQPH 290
            ..|..|.|: .|..|.||....||..|.|.|:|||..|:.|||.||.||::||..||::||...:
Zfish  1617 SQPLQVYCD-MTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQY 1680

  Fly   291 ELYISIRRFGGETSYAHYDDFLIGSEEEGYELKLLGHYQGNASDALRTHDKMKFSTYDRDND-AF 354
            ||.:.:|. .||::||.||.|.|......|::. :|.|.|.|.|::..|....|||||.||| |.
Zfish  1681 ELRVDLRD-KGESAYAQYDKFSISEPRARYKVH-VGGYSGTAGDSMTYHHGRPFSTYDNDNDIAV 1743

  Fly   355 THMNCAEHHQGAWWYDFCSRSNLNGRYFKGEVDNPQSIYWEPWYSF-RSLKSVQMLIRP 412
            |  |||..::||:||..|.|.|:.|||  |:..:.:.:.|..|... .|::..:|.|||
Zfish  1744 T--NCALSYKGAFWYKNCHRVNIMGRY--GDNSHSKGVNWFHWKGHEHSVEFAEMKIRP 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 MAD 71..>198 CDD:461677 29/142 (20%)
FReD 213..413 CDD:238040 82/204 (40%)
tncbNP_001299845.1 EGF_Tenascin 225..252 CDD:480934
EGF_Tenascin 256..283 CDD:480934
EGF_Tenascin 318..345 CDD:480934
EGF_Tenascin 380..407 CDD:480934
PRK10767 <471..>544 CDD:236757
EGF_Tenascin 535..562 CDD:480934
EGF_Tenascin 566..593 CDD:480934
EGF_Tenascin 597..623 CDD:480934
EGF_Tenascin 628..655 CDD:480934
EGF_Tenascin 659..686 CDD:480934
FN3 <689..>908 CDD:442628
FN3 <853..1296 CDD:442628
FN3 <1333..>1568 CDD:442628 28/132 (21%)
FReD 1589..1798 CDD:238040 86/223 (39%)
Blue background indicates that the domain is not in the aligned region.

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