DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8642 and Tnr

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_071707.2 Gene:Tnr / 21960 MGIID:99516 Length:1358 Species:Mus musculus


Alignment Length:412 Identity:125/412 - (30%)
Similarity:185/412 - (44%) Gaps:56/412 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PSKIKSTTKAPVKEIPP-----TNGTQIGNVTAVAPVPE--KLAEVHIDQHKTIRI--SKGDLDD 77
            |::.....|||:.|:..     |:....|....|..|.|  :|.::....|.|:.:  :.|.|  
Mouse   966 PTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGVSEEFQLVDLLPSTHYTVTMYATSGPL-- 1028

  Fly    78 LLDVYMGKIAESAATIKDKENEINKLQTKDQTGDELLRKFENLT-QVCSAQQSSFTTAIKEKDEQ 141
                ..|.||.:.:|:.|..:.:        |..|:.|:...:: |...|...::....|..|..
Mouse  1029 ----MSGTIATNFSTLLDPPDNL--------TASEVTRQSALISWQPPRAAIENYVLTYKSTDGS 1081

  Fly   142 IKELEQKVKVYETRLKRKQH------VLAELRKLNGSSALLIEHLKGKVVYFERKFREKKDDLLA 200
            .|||....:....||:....      :|...::...||........|     .|.|...:|....
Mouse  1082 RKELIVDAEDTWIRLEGLSENTDYTVLLQAAQEATRSSLTSTVFTTG-----GRVFSHPQDCAQH 1141

  Fly   201 DWEAATTSCVPFGRSPGIHLIHLPGFL--PFLVPCEGQTAAGPGWTCIQRRLDGSVNFYRNWDAY 263
            .....|.|        |::.|.|.|.|  ...|.|: .|..|.||...|||.:|..:|:|.|..|
Mouse  1142 LMNGDTLS--------GVYTIFLNGELSHKLQVYCD-MTTDGGGWIVFQRRQNGQTDFFRKWADY 1197

  Fly   264 SKGFGKLNGEFFIGLEKLHRLTSSQPHELYISIRRFGGETSYAHYDDFLIGSEEEGYELKLLGHY 328
            ..|||.|..||::||:.:||:|:...:||.:.:|. |.|..:|:||.|.:......|::: :|.|
Mouse  1198 RVGFGNLEDEFWLGLDNIHRITAQGRYELRVDMRD-GQEAVFAYYDKFAVEDSRSLYKIR-IGSY 1260

  Fly   329 QGNASDALRTHDKMKFSTYDRDND-AFTHMNCAEHHQGAWWYDFCSRSNLNGRYFKGEVDNPQSI 392
            .|.|.|:|..|....|||.||||| |.|  |||..::|||||..|.|:||||:|  ||..:.|.|
Mouse  1261 NGTAGDSLSYHQGRPFSTEDRDNDVAVT--NCAMSYKGAWWYKNCHRTNLNGKY--GESRHSQGI 1321

  Fly   393 YWEPW--YSFRSLKSVQMLIRP 412
            .|..|  :.| |:..|:|.:||
Mouse  1322 NWYHWKGHEF-SIPFVEMKMRP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 19/97 (20%)
FReD 213..413 CDD:238040 84/205 (41%)
TnrNP_071707.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..58
exchanger_TraA <190..>328 CDD:411343
EGF_Tenascin 203..231 CDD:376143
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 595..679 CDD:238020
fn3 687..766 CDD:394996
fn3 776..855 CDD:394996
fn3 865..944 CDD:394996
fn3 954..1026 CDD:394996 13/59 (22%)
FN3 1042..1127 CDD:238020 16/92 (17%)
FBG 1134..1343 CDD:214548 87/225 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - LDO PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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