DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and tnc

DIOPT Version :10

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_004916768.1 Gene:tnc / 100494697 XenbaseID:XB-GENE-1002816 Length:1829 Species:Xenopus tropicalis


Alignment Length:433 Identity:129/433 - (29%)
Similarity:197/433 - (45%) Gaps:80/433 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KEIPPTNGTQIGNVTAVAPVPEKLAEVHIDQHKTIRI---SKGDLDDLLDVYMGKIAESAATIKD 95
            :|..|.:||    .|.....|..|..|:|.:...:.:   |...:|:.:..|..|.| .|.|...
 Frog  1414 EESEPASGT----FTTALDSPSGLKVVNITESDALALWQPSLASVDNYVFSYSAKNA-PAVTHSI 1473

  Fly    96 KENEI-NKLQTKDQTGDELLRKFENLTQVCSAQQSS-FTTAIK-EKDEQIKELEQK--------- 148
            ..|.: |.|.....:.:..::.:....|..||:.|: ||||:. .:|....|::.:         
 Frog  1474 SGNTVENDLIGLHPSTEYTVKVYAVRGQHRSAEISTKFTTALDGPRDLSASEIQSESALLTWKPP 1538

  Fly   149 -------VKVYET--------------------RLKRKQHVLAELRKLNGSSALLIEHLKGKVVY 186
                   |.:||:                    .|......:|.::.:||               
 Frog  1539 RSTITGYVLIYESVDGTVKEVVVGPDTTSYRLLDLSPSAQYIARVQAING--------------- 1588

  Fly   187 FERKFREKKD-----DLLADWEAATTSCVPFGRS-PGIHLIHLPG--FLPFLVPCEGQTAAGPGW 243
             :|:.:|.:.     .||..:....:..:..|.: .|::.|::.|  ..|..|.|: .:..|.||
 Frog  1589 -DRRSKEIQTIFITIGLLYPYPKDCSQALLNGEADSGLYTIYVNGDQSQPMEVYCD-MSVDGGGW 1651

  Fly   244 TCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKLHRLTSSQPHELYISIRRFGGETSYAHY 308
            ....||.|||..|||||..||.|||.:|.|||:|||.||:|||...:||.:.:|. ..||:||.|
 Frog  1652 IVFLRRTDGSEEFYRNWKTYSAGFGNINNEFFMGLENLHKLTSLGQYELRVDLRD-NDETAYAVY 1715

  Fly   309 DDFLIGSEEEGYELKLLGHYQGNASDALRTHDKMKFSTYDRDND-AFTHMNCAEHHQGAWWYDFC 372
            |.|.:|..:..:.||:.| |.|.|.|::..|:...|||:|:||| |.|  |||..::||:||..|
 Frog  1716 DKFSVGDAKSRFRLKVEG-YSGTAGDSMTYHNGRSFSTFDKDNDSAIT--NCALSYKGAFWYKNC 1777

  Fly   373 SRSNLNGRYFKGEVDNPQSIYWEPWYSFR-SLKSVQMLIRPKS 414
            .|.||.|||  |:.::.|.:.|..|.... |::..:|.|||.|
 Frog  1778 HRVNLMGRY--GDTNHSQGVNWFHWKGHEYSIQFAEMKIRPVS 1818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 MAD 71..>198 CDD:461677 29/170 (17%)
FReD 213..413 CDD:238040 87/204 (43%)
tncXP_004916768.1 EGF_Tenascin 187..214 CDD:480934
EGF_Tenascin 249..276 CDD:480934
EGF_Tenascin 280..307 CDD:480934
EGF_Tenascin 342..369 CDD:480934
EGF_Tenascin 373..399 CDD:480934
EGF_Tenascin 404..431 CDD:480934
EGF_Tenascin 435..461 CDD:480934
EGF_Tenascin 466..492 CDD:480934
EGF_Tenascin 497..524 CDD:480934
EGF_Tenascin 528..554 CDD:480934
EGF_Tenascin 559..586 CDD:480934
EGF_Tenascin 590..617 CDD:480934
fn3 620..691 CDD:394996
FN3 724..1230 CDD:442628
FN3 1241..>1589 CDD:442628 36/195 (18%)
FReD 1607..1817 CDD:238040 87/216 (40%)
Blue background indicates that the domain is not in the aligned region.

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