DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8642 and tnn

DIOPT Version :9

Sequence 1:NP_610396.2 Gene:CG8642 / 35845 FlyBaseID:FBgn0033312 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_017949080.2 Gene:tnn / 100491528 XenbaseID:XB-GENE-998034 Length:1109 Species:Xenopus tropicalis


Alignment Length:434 Identity:128/434 - (29%)
Similarity:199/434 - (45%) Gaps:90/434 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GTQIGNVTAVAPVPEKLAEVHIDQHKTIRISKGDLDDLL---------DVYMGKIAESAATIKD- 95
            |||....|:|..|.|      ||..|.::.||......|         |.|:..:.:|....:: 
 Frog   700 GTQQSKRTSVTAVTE------IDPPKNLQYSKSQPQASLTWNQPIAQIDGYVLVLEDSDGGQQEI 758

  Fly    96 -KENEINKLQTKD-------------QTGDELLRKFENLTQVCSAQQSSFTTAIKE----KDEQI 142
             .::.:|..:.:|             ..||   |:...:|       :||.|.|..    :...:
 Frog   759 QLDSTVNNFELQDLNKGLKYTVYLLAYRGD---RRSRQVT-------TSFYTDIDPPTNLQSFDV 813

  Fly   143 KELEQKVKVYETRLKRKQHVLA---------ELRKLNGSSALLIEHLKGKVVY--FERKFREKKD 196
            .:.|..:.....|.|...::|.         |::..:.|.:..:::||..:.|  :...|   |.
 Frog   814 TQTEASLTWTPPRAKIDGYILTYTDADGSTEEIQLDSSSKSFAMKNLKKGLKYTVYLTAF---KG 875

  Fly   197 DLLADWEAATTSCVPF---------------GRSPGIHLIHLPG---FLPFLVPCEGQTAAGPGW 243
            |..:...:...|.|.|               .|..|::.|: ||   .....|.|:.:|..| ||
 Frog   876 DSRSSQASTIFSTVAFIITHPSDCIQIQLSGNRQSGVYTIY-PGGDTAKGVRVYCDQETDGG-GW 938

  Fly   244 TCIQRRLDGSVNFYRNWDAYSKGFGKLNGEFFIGLEKLHRLTSS--QPHELYISIRRFGGETSYA 306
            ...|||..|.::||:.|..|.:|||..:.||::|||.:|:||||  ..:|:.:.:|. |.|:.||
 Frog   939 IVFQRRNSGKLDFYQRWRTYVEGFGDPSDEFWLGLEWIHKLTSSPGNNYEIRVDLRA-GDESVYA 1002

  Fly   307 HYDDFLIGSEEEGYELKLLGHYQGNASDALRTHDKMKFSTYDRDND-AFTHMNCAEHHQGAWWYD 370
            .|.:|.:||.::.|:|. :..|.|.|.|.|..|:..||||:|:||| |.|  |||..|:||:||.
 Frog  1003 FYRNFRVGSSKDRYKLS-ISDYSGTAGDGLTYHNGWKFSTWDKDNDIALT--NCALSHRGAFWYK 1064

  Fly   371 FCSRSNLNGRYFKGEVDNPQSIYWEPW--YSFRSLKSVQMLIRP 412
            .|..:||||:|  ||..:.|.:.||||  :.| |:..|:|.:||
 Frog  1065 NCHLANLNGQY--GETGHSQGVNWEPWKGHEF-SVPFVEMKMRP 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8642NP_610396.2 GluZincin 72..>163 CDD:301352 18/118 (15%)
FReD 213..413 CDD:238040 87/208 (42%)
tnnXP_017949080.2 exchanger_TraA <124..432 CDD:411343
fn3 449..513 CDD:394996
fn3 543..619 CDD:394996
fn3 630..707 CDD:394996 3/6 (50%)
fn3 716..788 CDD:394996 10/71 (14%)
fn3 803..879 CDD:394996 12/78 (15%)
FReD 895..1105 CDD:238040 85/218 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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