DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgr and ZAP1

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_012479.1 Gene:ZAP1 / 853390 SGDID:S000003592 Length:880 Species:Saccharomyces cerevisiae


Alignment Length:828 Identity:164/828 - (19%)
Similarity:266/828 - (32%) Gaps:256/828 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 IAPPPGPPTPNPTPTATPAPLPRYETRRVRQRLCTISSTTIN-----PGQD------RLAGQRLS 241
            :|..|..|..|     :.:.|||.:.......|..:.|:..|     ||.|      ::......
Yeast   145 VASDPTSPQQN-----SKSDLPRRKDSWFNDDLILLPSSKKNKPNPPPGSDDCYCTPKILEICCD 204

  Fly   242 RREPNTGNAMQRKLRQSQNEQPKDGAVDE----VAV---------------------------EE 275
            ...|.:    :..::|.:::||....:.|    ||:                           ..
Yeast   205 ETHPKS----EANIKQGESDQPTKKDISENGNDVAIFTDVKNDHLMPNFNLHDQYCNSTNHDSHN 265

  Fly   276 HKGTEPT--GQPEKSAMELTPPATPPTP-LPPTSPTSSTASCADFQSKSRRELERNHEFVGCLLR 337
            |..|.|.  .|......|:....|..|| ...||.||......|.||.:..::  .|::  |...
Yeast   266 HNNTVPDSFSQLMSHLSEIDCDLTCDTPCTASTSATSGHKFVQDHQSSNNDDV--FHKY--CKFC 326

  Fly   338 EYERTEKLWNPRHPDYKYNAKRSAYGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELKKVNA 402
            | |.|:.                      .|.....|.:....::......||       |..|.
Yeast   327 E-ESTDN----------------------QPCSKHMHLESKPPQLPPKCSSLR-------KPTNT 361

  Fly   403 LGGKYKSRLWYFER-----MDFL----RCVIENRRAEREAKISNESTESEKSCETDADSCGKSSL 458
            |.|...:   |.|.     ||..    .|.|.:.......|..|....:......|..|.|.:..
Yeast   362 LQGTNHA---YHEHILNTDMDLKILEDLCNISSLYEVPFGKHINHHDHNNAGNGCDGSSTGNNEN 423

  Fly   459 YHEVLSFILDAFKRQECLWNP-------------------QHYDY-------------------- 484
            .::.::.:|.:..|  |  ||                   ||:.:                    
Yeast   424 GNQTMNLLLSSINR--C--NPKNNLNGSNNNTAGATSTDHQHHHHRIQFHSHKPNRNNIVNNSGI 484

  Fly   485 ----TTCCKTELFRDISVQLQEELNYELSGEECCNEIQKLRTRYRKELRMVIKHKGLYLPKLWCY 545
                ||...|.  .|::..:..|.:||           :.|.:........:.|:.....:.|..
Yeast   485 SAANTTADLTN--NDLNDLISREYSYE-----------RFRNQSEPPSLPKVTHQNQKNRRSWPT 536

  Fly   546 DEMEFLQ-PILQEQIFNKISKKIGVVGSNQKTKFIDASSIRFD-------NTEKQLQFVEIYHNY 602
            .::|... ..|::.:.:.||..|      |.|     |:|.|:       |.:.:.::.|...:.
Yeast   537 KDLESTDFSSLEDSLPSSISPPI------QTT-----STINFNWCFKEEKNNDLKCKWKECPESC 590

  Fly   603 SALWDV------DH--PDFR-------SNTYRSQALG----QMLDEINTTFHTSYTAEQLEKTLF 648
            |:|:|:      ||  .||:       .|......||    .:::.||.....::..:......|
Yeast   591 SSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTCSIVNHINCQHGINFDIQFANPDSF 655

  Fly   649 NLRKEFSAQKRKIL-------------------TESEDSSSIPLLHAKLAEFLDQNLGPFR---- 690
             |....|.:|..:|                   |.:.|.|:||               |.:    
Yeast   656 -LPGSISKEKHHLLHCPNPQTHEVSKADGAPDMTSANDVSNIP---------------PIKQPEQ 704

  Fly   691 --C--DICSDLVKTCDQYKVHRSA-H--DGTQPFICTL--CGKGFQMPCNLTVHIRRHRRDFPYS 746
              |  |.|:....:..:...|..| |  .|...:.|..  |.:.|.....|..|::.|.:..||.
Yeast   705 VICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYK 769

  Fly   747 CEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHCPICAKGFY 811
            |:.|.:.|::...:..|.|||:||:||.|.:|.|.|...|...||.|.|..:....|.||.|.|.
Yeast   770 CKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFN 834

  Fly   812 EKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKC 859
            |.:..:.|:.:|.  :|:.|:.|.|:|...|.|..        :|.||
Yeast   835 ESSNLSKHIKTHQ--KKYKCSDCSKSFDDLGKLNS--------QKVKC 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738 17/99 (17%)
MADF 466..556 CDD:214738 18/133 (14%)
MADF_DNA_bdg 595..682 CDD:463144 23/124 (19%)
C2H2 Zn finger 691..711 CDD:275368 5/22 (23%)
C2H2 Zn finger 719..739 CDD:275368 5/21 (24%)
COG5048 742..>824 CDD:227381 29/81 (36%)
C2H2 Zn finger 747..767 CDD:275368 5/19 (26%)
C2H2 Zn finger 775..795 CDD:275368 8/19 (42%)
C2H2 Zn finger 803..818 CDD:275368 6/14 (43%)
C2H2 Zn finger 831..851 CDD:275368 6/19 (32%)
C2H2 Zn finger 859..877 CDD:275368 1/1 (100%)
ZAP1NP_012479.1 COG5048 292..761 CDD:227381 97/549 (18%)
C2H2 Zn finger 743..762 CDD:275368 4/18 (22%)
SUF4-like 766..>814 CDD:411020 18/47 (38%)
C2H2 Zn finger 770..795 CDD:411020 9/24 (38%)
C2H2 Zn finger 770..790 CDD:275368 5/19 (26%)
C2H2 Zn finger 798..818 CDD:275368 8/19 (42%)
zf-H2C2_2 810..834 CDD:463886 8/23 (35%)
C2H2 Zn finger 826..846 CDD:275368 7/19 (37%)

Return to query results.
Submit another query.