DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and ZNF148

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_068799.2 Gene:ZNF148 / 7707 HGNCID:12933 Length:794 Species:Homo sapiens


Alignment Length:325 Identity:74/325 - (22%)
Similarity:123/325 - (37%) Gaps:79/325 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 KHKGLYLPKLWCYDEMEFLQPILQEQIFNKISKKIGVVGSNQKT----------KFIDASSIRFD 587
            |.:||:| |....|||:..:.::   :...:|.:..|.|..|.:          :.:.|..:..:
Human     6 KLEGLFL-KCGGIDEMQSSRTMV---VMGGVSGQSTVSGELQDSVLQDRSMPHQEILAADEVLQE 66

  Fly   588 NTEKQLQFVE----IYHNYSALWDVDHPDFRSNTYRSQALGQMLD-EINTTFHTSYT--AEQLEK 645
            :..:|...:.    :.|..:.  ..|.....::....|.|...|: .|:.....::|  :|||.:
Human    67 SEMRQQDMISHDELMVHEETV--KNDEEQMETHERLPQGLQYALNVPISVKQEITFTDVSEQLMR 129

  Fly   646 TLFNLRKEFSAQKR---------KILTESEDSSSIPLLHAKLAEFLDQNLGPFRCDICSDLVKTC 701
            ....:|:....||:         ||||.:||.|                ||          :|| 
Human   130 DKKQIREPVDLQKKKKRKQRSPAKILTINEDGS----------------LG----------LKT- 167

  Fly   702 DQYKVHRSAHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYSCEQCDKRFATSTEVAIHLRT 766
              .|.|          :|..|...|:...:|..|:..|..:.|:.|.|||.||.....:..|.:.
Human   168 --PKSH----------VCEHCNAAFRTNYHLQRHVFIHTGEKPFQCSQCDMRFIQKYLLQRHEKI 220

  Fly   767 HTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHCPICAKGFYEKNRFTDHMNSHWAIRKHLC 831
            ||||:|:.||.||..|......:.|:|.|..:..:.|..|.:.|...:|...|        |.:|
Human   221 HTGEKPFRCDECGMRFIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTDRVLKH--------KRMC 277

  Fly   832  831
            Human   278  277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738
MADF 466..556 CDD:214738 8/22 (36%)
MADF_DNA_bdg 595..682 CDD:463144 20/102 (20%)
C2H2 Zn finger 691..711 CDD:275368 4/19 (21%)
C2H2 Zn finger 719..739 CDD:275368 5/19 (26%)
COG5048 742..>824 CDD:227381 26/81 (32%)
C2H2 Zn finger 747..767 CDD:275368 7/19 (37%)
C2H2 Zn finger 775..795 CDD:275368 7/19 (37%)
C2H2 Zn finger 803..818 CDD:275368 4/14 (29%)
C2H2 Zn finger 831..851 CDD:275368 1/1 (100%)
C2H2 Zn finger 859..877 CDD:275368
ZNF148NP_068799.2 zf-C2H2 171..193 CDD:395048 6/31 (19%)
C2H2 Zn finger 173..193 CDD:275368 5/19 (26%)
zf-H2C2_2 185..210 CDD:463886 10/24 (42%)
C2H2 Zn finger 201..221 CDD:275368 7/19 (37%)
zf-H2C2_2 214..238 CDD:463886 11/23 (48%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-H2C2_2 241..266 CDD:463886 6/24 (25%)
C2H2 Zn finger 257..275 CDD:275368 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..336
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..596
Blue background indicates that the domain is not in the aligned region.

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