DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and ZKSCAN1

DIOPT Version :9

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001333510.1 Gene:ZKSCAN1 / 7586 HGNCID:13101 Length:563 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF_DNA_bdg 335..420 CDD:287510
MADF_DNA_bdg 465..551 CDD:287510
MADF_DNA_bdg 595..682 CDD:287510
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
zf-H2C2_2 731..756 CDD:290200
COG5048 742..>824 CDD:227381
C2H2 Zn finger 747..767 CDD:275368
zf-H2C2_2 763..784 CDD:290200
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..818 CDD:275368
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
ZKSCAN1NP_001333510.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
SCAN 52..162 CDD:128708
KRAB_A-box 227..262 CDD:143639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..373
C2H2 Zn finger 355..371 CDD:275368
COG5048 <356..537 CDD:227381
C2H2 Zn finger 379..399 CDD:275368
C2H2 Zn finger 407..427 CDD:275368
C2H2 Zn finger 435..455 CDD:275368
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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