DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgr and ZSCAN20

DIOPT Version :9

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001364305.1 Gene:ZSCAN20 / 7579 HGNCID:13093 Length:1043 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF_DNA_bdg 335..420 CDD:287510
MADF_DNA_bdg 465..551 CDD:287510
MADF_DNA_bdg 595..682 CDD:287510
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
zf-H2C2_2 731..756 CDD:290200
COG5048 742..>824 CDD:227381
C2H2 Zn finger 747..767 CDD:275368
zf-H2C2_2 763..784 CDD:290200
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..818 CDD:275368
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
ZSCAN20NP_001364305.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..49
SCAN 47..132 CDD:396558
Myb_DNA-bind_4 323..404 CDD:404682
Myb_DNA-bind_4 483..564 CDD:404682
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..692
COG5048 699..>1029 CDD:227381
C2H2 Zn finger 712..732 CDD:275368
C2H2 Zn finger 740..760 CDD:275368
C2H2 Zn finger 768..788 CDD:275368
C2H2 Zn finger 796..816 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 835..873
C2H2 Zn finger 877..897 CDD:275368
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 933..953 CDD:275368
C2H2 Zn finger 961..981 CDD:275368
C2H2 Zn finger 989..1009 CDD:275368
C2H2 Zn finger 1017..1037 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.