DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgr and ZNF410

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001229853.1 Gene:ZNF410 / 57862 HGNCID:20144 Length:516 Species:Homo sapiens


Alignment Length:108 Identity:26/108 - (24%)
Similarity:45/108 - (41%) Gaps:12/108 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 LEELKAIKLKEIREKIQRLKEIAATEKLAM-DVDDLESEFDPDEHDRRMKAMFDDEYYGV----- 397
            |:..:.:.::|.:.|...|...||.:.|.: |:.:|.:|.:..:|..| ..:.....||:     
Human    86 LQMYRQLDIREHKGKTPLLVAAAANQPLIVEDLLNLGAEPNATDHQGR-SVLHVAATYGLPGVLS 149

  Fly   398 ---DEGDQKP-EFPDLDQELGIENYDVERLKDD-DEEGAEPHC 435
               ..|.|.. |..|.:.||.:...||....|. |.:...|:|
Human   150 AVFKSGIQVDLEARDFEGELVLPRADVVGWLDRVDTQVQVPYC 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738 22/95 (23%)
MADF 466..556 CDD:214738
MADF_DNA_bdg 595..682 CDD:463144
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
COG5048 742..>824 CDD:227381
C2H2 Zn finger 747..767 CDD:275368
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..818 CDD:275368
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
ZNF410NP_001229853.1 SFP1 <206..317 CDD:227516
COG5048 262..>516 CDD:227381
C2H2 Zn finger 271..290 CDD:275370
C2H2 Zn finger 298..320 CDD:275368
C2H2 Zn finger 328..350 CDD:275368
zf-H2C2_2 342..367 CDD:463886
C2H2 Zn finger 358..378 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.