DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and znf692

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001116748.1 Gene:znf692 / 565874 ZFINID:ZDB-GENE-081104-484 Length:503 Species:Danio rerio


Alignment Length:487 Identity:113/487 - (23%)
Similarity:186/487 - (38%) Gaps:118/487 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 VIENRRAEREAKISNESTESEKSCETDA---DSCGKSSLYHEVLSFILDAFKRQECLWNPQHYDY 484
            |:..||.|.:|:.|..........::.|   |..| .||:.|:...:|:::..:.|:        
Zfish     8 VLRQRRRELDARRSKSRVRLGSCLQSWAQLKDKLG-FSLHSELAQHLLESYVSRVCM-------- 63

  Fly   485 TTCC---KTELFRDISVQLQEEL----NYELSGEEC-------CNEIQKLRTRYRKELRMVIKHK 535
             .|.   |.|........|||.:    |:   |:.|       |..:||.:...|.:...:   :
Zfish    64 -KCSGDGKEETVSTTKESLQELILMVHNH---GQTCPLPPVLQCRPVQKTKLSTRSQSGRI---E 121

  Fly   536 GLYLPK-------------------LWCYDEMEFLQPILQEQIFNKISKKIG-------VVGSNQ 574
            ....||                   :||...:|  :.::.:...:||:.:.|       |..:.:
Zfish   122 AATEPKKLAEADECFKYTCEDGHHFMWCPFNLE--KVLISKNEGDKITSEQGKRQMKEPVTDTER 184

  Fly   575 K---TKFIDASSIRFD---NTEKQLQFVEIYHNYSALWDV-------DHPDFRSN-TYRSQALGQ 625
            :   |:.......|.|   ||.|.|.     .|.:|  ||       |..|..|: :|.......
Zfish   185 QEMMTRLKTRQQQREDAGTNTNKMLG-----QNKNA--DVTETLEAQDKNDLASDFSYSEHGSPA 242

  Fly   626 MLDEINTTFHTSYTAEQLEKTLFNL-----------RKEFSAQKRKILTESEDSSSIPLLHAKLA 679
            ..||:......|:|....|..:.||           .::.|..|:..:.:|..|.|       |.
Zfish   243 DSDEMTVDVPVSHTDSYEEFAVLNLTNRGTQSSADHTEKLSVSKKAGILQSNSSQS-------LK 300

  Fly   680 EFLDQNLGPFRCDICSDLVKTCD-----------QYKVH--RSAHDGTQPFICT--LCGKGFQMP 729
            :.:.|..|..:....|.|:.:|:           ||..|  :..|...:.|.|:  .|.|.|...
Zfish   301 KDMSQIGGKRKRKSTSKLILSCEFDGCDKIFSSRQYLNHHIKYQHLHQKTFTCSHPSCRKSFNFK 365

  Fly   730 CNLTVHIRRHRRDFPYSCEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRR 794
            .:|..|.:.|.....|.||.|.:.|.||:.:.||.|.||||:|..|::||.:.:..:..:.|.|:
Zfish   366 KHLKEHEKLHSNQRDYICEFCARAFRTSSNLIIHRRIHTGEKPLQCEVCGFTCRQKASLNWHMRK 430

  Fly   795 HLNQST--FHCPICAKGFYEKNRFTDHMN-SH 823
            |..:||  |.|.||.:.|.:::..|.|.: ||
Zfish   431 HNAESTYQFPCEICGRRFEKRDNVTAHRSKSH 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738 1/1 (100%)
MADF 466..556 CDD:214738 20/122 (16%)
MADF_DNA_bdg 595..682 CDD:463144 21/105 (20%)
C2H2 Zn finger 691..711 CDD:275368 6/32 (19%)
C2H2 Zn finger 719..739 CDD:275368 6/21 (29%)
COG5048 742..>824 CDD:227381 32/85 (38%)
C2H2 Zn finger 747..767 CDD:275368 9/19 (47%)
C2H2 Zn finger 775..795 CDD:275368 5/19 (26%)
C2H2 Zn finger 803..818 CDD:275368 4/14 (29%)
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
znf692NP_001116748.1 SFP1 <159..400 CDD:227516 57/254 (22%)
C2H2 Zn finger 356..375 CDD:275368 5/18 (28%)
C2H2 Zn finger 383..403 CDD:275368 9/19 (47%)
C2H2 Zn finger 411..431 CDD:275368 5/19 (26%)
C2H2 Zn finger 441..458 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

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