DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and CG6813

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:23 Identity:7/23 - (30%)
Similarity:13/23 - (56%) Gaps:6/23 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 DLDQELG------IENYDVERLK 424
            |...|:|      |:||::.::|
  Fly    20 DFLSEIGGPSEEQIDNYNIMKIK 42

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738 7/23 (30%)
MADF 466..556 CDD:214738
MADF_DNA_bdg 595..682 CDD:463144
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
COG5048 742..>824 CDD:227381
C2H2 Zn finger 747..767 CDD:275368
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..818 CDD:275368
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 7/23 (30%)
C2H2 Zn finger 144..164 CDD:275368
C2H2 Zn finger 172..194 CDD:275368
UFD2 <256..>294 CDD:227443
C2H2 Zn finger 258..280 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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