Sequence 1: | NP_001163089.2 | Gene: | rgr / 35843 | FlyBaseID: | FBgn0267792 | Length: | 889 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
Alignment Length: | 732 | Identity: | 145/732 - (19%) |
---|---|---|---|
Similarity: | 241/732 - (32%) | Gaps: | 187/732 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 243 REPNTGNAMQRKLRQSQNEQPKDGAVDEVAVEEHKGTEPTGQP-----EKSAMELTPPATPPTPL 302
Fly 303 PPTSPTSSTASCADFQSKSRRELERNHEFVGCLLREYERTEKLWNPRHPDYKYNA------KRSA 361
Fly 362 YGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELKKVNAL-----------GGKYKSRLWYFE 415
Fly 416 -----RMDFLRCVIENRRAEREAKISNESTESEKSCETDADSC-----GKSSLYHEVLSFILDAF 470
Fly 471 KRQECLWNPQH-YDYTTCCKTEL-----FRDISV-----------QLQEELNYELSGEECCNEIQ 518
Fly 519 KLRTRYRKELRMVIKHKGLYLPKLWCYDEMEFLQPILQEQIFN-------------------KIS 564
Fly 565 KKIGVVGSNQKTKFIDASSIRFDNTEKQLQFVEIYHNYSALWDVDHPDFRSNTYRSQALGQMLDE 629
Fly 630 INTT----------FHTSYTAEQLEKTLFNLRKEF---SAQKRK-ILTESEDSSSIPLLHAKLAE 680
Fly 681 FLDQNLGPFRCDICSDLVKTCDQYKVHRSAH---DGTQPFICTLCGKGF-QMPCNLTVHIRRHRR 741
Fly 742 DFPYSCEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHCPIC 806
Fly 807 AKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCGTCGKRFAQFAS 871
Fly 872 LRWHKKREHSSVGQAGG 888 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rgr | NP_001163089.2 | MADF_DNA_bdg | 335..420 | CDD:287510 | 19/106 (18%) |
MADF_DNA_bdg | 465..551 | CDD:287510 | 15/102 (15%) | ||
MADF_DNA_bdg | 595..682 | CDD:287510 | 13/100 (13%) | ||
C2H2 Zn finger | 691..711 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 719..739 | CDD:275368 | 8/20 (40%) | ||
zf-H2C2_2 | 731..756 | CDD:290200 | 8/24 (33%) | ||
COG5048 | 742..>824 | CDD:227381 | 29/81 (36%) | ||
C2H2 Zn finger | 747..767 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 763..784 | CDD:290200 | 14/20 (70%) | ||
C2H2 Zn finger | 775..795 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 803..818 | CDD:275368 | 5/14 (36%) | ||
C2H2 Zn finger | 831..851 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 859..877 | CDD:275368 | 4/17 (24%) | ||
scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 4/21 (19%) |
C2H2 Zn finger | 469..489 | CDD:275370 | 4/19 (21%) | ||
C2H2 Zn finger | 500..520 | CDD:275368 | 8/20 (40%) | ||
COG5048 | 520..>617 | CDD:227381 | 38/117 (32%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 539..562 | CDD:290200 | 13/22 (59%) | ||
C2H2 Zn finger | 554..574 | CDD:275368 | 7/19 (37%) | ||
zf-C2H2 | 554..574 | CDD:278523 | 7/19 (37%) | ||
zf-H2C2_2 | 566..590 | CDD:290200 | 6/23 (26%) | ||
C2H2 Zn finger | 582..599 | CDD:275368 | 7/26 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457100 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |