DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and CG4282

DIOPT Version :9

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF_DNA_bdg 335..420 CDD:287510
MADF_DNA_bdg 465..551 CDD:287510
MADF_DNA_bdg 595..682 CDD:287510
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
zf-H2C2_2 731..756 CDD:290200
COG5048 742..>824 CDD:227381
C2H2 Zn finger 747..767 CDD:275368
zf-H2C2_2 763..784 CDD:290200
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..818 CDD:275368
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368
C2H2 Zn finger 360..378 CDD:275368
LIM 361..>400 CDD:295319
C2H2 Zn finger 386..406 CDD:275368
zf-C2H2_8 389..465 CDD:292531
C2H2 Zn finger 417..438 CDD:275368
C2H2 Zn finger 448..465 CDD:275368
C2H2 Zn finger 477..498 CDD:275368
C2H2 Zn finger 511..532 CDD:275368
C2H2 Zn finger 541..562 CDD:275368
C2H2 Zn finger 570..590 CDD:275368
C2H2 Zn finger 598..619 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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