DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and ZSCAN22

DIOPT Version :9

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001308045.1 Gene:ZSCAN22 / 342945 HGNCID:4929 Length:491 Species:Homo sapiens


Alignment Length:537 Identity:130/537 - (24%)
Similarity:202/537 - (37%) Gaps:115/537 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 YGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELKKVNALGGKYKSRLWYFERM---DFLRCV 423
            |.:.:||.|::.|           |:.|.|::         |..:..|:....|.:   .||..:
Human    57 YEEASGPHEALAH-----------LRALCCQW---------LQPEAHSKEQILELLVLEQFLGAL 101

  Fly   424 IENRRAEREAKISNESTESEKSCETDADSCGKSSLYHEVLSFILDAFKRQECLWNPQHYDYTTCC 488
                ..|.:|.:..:|.:|.:          ::::..|.|:.:||  ||.   |:|........|
Human   102 ----PPEIQAWVGAQSPKSGE----------EAAVLVEDLTQVLD--KRG---WDPGAEPTEASC 147

  Fly   489 KTELFRDISVQLQEELNYELSG---------EECCNEIQKLRTRYRKELRMVIKHKGLYLPKLWC 544
            |..   |:.......:...|.|         :.|..|....|:....|              :| 
Human   148 KQS---DLGESEPSNVTETLMGGVSLGPAFVKACEPEGSSERSGLSGE--------------IW- 194

  Fly   545 YDEMEFLQPILQEQIFNKISKKIGVVGSNQKTKFIDASSIRFDNTEKQLQFVEIYHNYSALWDVD 609
                  .:.:.|:..|.|.|.....|.::|:.:...||                 .|.|:.|   
Human   195 ------TKSVTQQIHFKKTSGPYKDVPTDQRGRESGAS-----------------RNSSSAW--- 233

  Fly   610 HPDFRSNTY-RSQALGQMLDEINTTFHTSYTAEQLEKTLFNLRKEFSAQKRKILTESEDSSSIPL 673
             |:..|... .|:....::|...|....:|:.::..|.. ..||.|            .|:|...
Human   234 -PNLTSQEKPPSEDKFDLVDAYGTEPPYTYSGKRSSKCR-ECRKMF------------QSASALE 284

  Fly   674 LHAKLAEFLDQNLGPFRCDICSDLVKTCDQYKVHRSAHDGTQPFICTLCGKGFQMPCNLTVHIRR 738
            .|.|    ......|:.|..|............|:..|.|.:|..|..|||.|....:||.|.|.
Human   285 AHQK----THSRKTPYACSECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRI 345

  Fly   739 HRRDFPYSCEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFHC 803
            |..:.||.|.:|.|.|:.||.:..|.|.|||||||.||.|||:|...:....|:|.|..:..:.|
Human   346 HTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKC 410

  Fly   804 PICAKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCGTCGKRFAQ 868
            ..|.:.|.:.:....|:..|...:.:.|.||.|.|....:|.:|..:|...|.|||..|||.|::
Human   411 DACGRAFSDCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSR 475

  Fly   869 FASLRWHKKREHSSVGQ 885
            .::|..| .|.|.:|.|
Human   476 SSALMVH-LRIHITVLQ 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF_DNA_bdg 335..420 CDD:287510 11/60 (18%)
MADF_DNA_bdg 465..551 CDD:287510 16/94 (17%)
MADF_DNA_bdg 595..682 CDD:287510 17/87 (20%)
C2H2 Zn finger 691..711 CDD:275368 3/19 (16%)
C2H2 Zn finger 719..739 CDD:275368 9/19 (47%)
zf-H2C2_2 731..756 CDD:290200 11/24 (46%)
COG5048 742..>824 CDD:227381 30/81 (37%)
C2H2 Zn finger 747..767 CDD:275368 8/19 (42%)
zf-H2C2_2 763..784 CDD:290200 15/20 (75%)
C2H2 Zn finger 775..795 CDD:275368 8/19 (42%)
C2H2 Zn finger 803..818 CDD:275368 3/14 (21%)
C2H2 Zn finger 831..851 CDD:275368 7/19 (37%)
C2H2 Zn finger 859..877 CDD:275368 7/17 (41%)
ZSCAN22NP_001308045.1 SCAN 45..133 CDD:307924 21/111 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..161 6/32 (19%)
COG5048 <174..482 CDD:227381 95/366 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..249 13/65 (20%)
C2H2 Zn finger 270..290 CDD:275368 7/36 (19%)
C2H2 Zn finger 298..318 CDD:275368 3/19 (16%)
C2H2 Zn finger 326..346 CDD:275368 9/19 (47%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 410..430 CDD:275368 4/19 (21%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
C2H2 Zn finger 466..486 CDD:275368 8/20 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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