DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgr and CG1529

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:308 Identity:82/308 - (26%)
Similarity:121/308 - (39%) Gaps:66/308 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 YRSQALGQMLDEINTTFHTSYTAEQLEKTLFNLRKEFSAQKRKILTESEDSSSIPLLHAKLAEFL 682
            :..||.||.:|                     |.|:...|| |||.:.|| ...|..:....:.|
  Fly   116 HEKQADGQQVD---------------------LSKKQEDQK-KILDDRED-EEYPDEYENSQQQL 157

  Fly   683 DQNLGPFR-----CDICSDLVKTCDQYKVH-RSAHDG-TQPFICTLCGKGFQMPCNLTVHIR--- 737
            .|..|..|     ||.|...|......:.| ||.|.| ::||:|..|.|.|.....|..|:|   
  Fly   158 SQGTGSKRRAGLACDQCGKQVYKLPYLEAHIRSVHQGYSKPFLCRSCDKSFTRYEQLRSHMRNAH 222

  Fly   738 -------RHRRDFPYSCEQCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRH 795
                   :..||.  .||.|:::::|...:..||:.|...:.::|:.||.:..|.:....|.|.|
  Fly   223 PQLEQLQQELRDL--ICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLTHLRTH 285

  Fly   796 LNQS--TFHCPICAKGFYEKNRFTDHMN-SHWAIRKHLCTVCGKTFTTYGNLKKHTELHL----- 852
             |.:  .|.|..|.:.|..|:..:.|:. .|...|:..|..|.|.|.|:.:..:|..||.     
  Fly   286 -NPTWERFKCEQCPQLFRHKSAISRHVRVVHEGQRRFQCGHCEKKFGTHASQVRHERLHTESTGS 349

  Fly   853 --AVKK--YKCGTCGKRFAQFASLRWH-----------KKREHSSVGQ 885
              |.::  :.|..|.|......:|..|           |:||||...|
  Fly   350 GEAAEEWPFACIHCQKPCVSRQTLELHLRRHRARKTHRKRREHSRESQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738
MADF 466..556 CDD:214738
MADF_DNA_bdg 595..682 CDD:463144 15/63 (24%)
C2H2 Zn finger 691..711 CDD:275368 7/20 (35%)
C2H2 Zn finger 719..739 CDD:275368 7/29 (24%)
COG5048 742..>824 CDD:227381 22/84 (26%)
C2H2 Zn finger 747..767 CDD:275368 6/19 (32%)
C2H2 Zn finger 775..795 CDD:275368 6/19 (32%)
C2H2 Zn finger 803..818 CDD:275368 4/14 (29%)
C2H2 Zn finger 831..851 CDD:275368 6/19 (32%)
C2H2 Zn finger 859..877 CDD:275368 5/28 (18%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:462262
C2H2 Zn finger 171..192 CDD:275368 7/20 (35%)
C2H2 Zn finger 201..222 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 265..285 CDD:275368 6/19 (32%)
C2H2 Zn finger 294..315 CDD:275368 5/20 (25%)
C2H2 Zn finger 323..343 CDD:275368 6/19 (32%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
tolA 391..>495 CDD:236545 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.