DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgr and POGZ

DIOPT Version :10

Sequence 1:NP_001163089.2 Gene:rgr / 35843 FlyBaseID:FBgn0267792 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001397789.1 Gene:POGZ / 23126 HGNCID:18801 Length:1417 Species:Homo sapiens


Alignment Length:288 Identity:62/288 - (21%)
Similarity:95/288 - (32%) Gaps:97/288 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   621 QALGQMLDEINTTFHTSYTAEQLEKTLFNLRKEFSAQKRKILTESEDSSSIPLLH--AKLAEFLD 683
            |..|:.||.              |.::.:..|..|.:|...:..:..|:.||.|.  .|:.| .:
Human   412 QKKGKSLDS--------------EPSVPSAAKPPSPEKTAPVASTPSSTPIPALSPPTKVPE-PN 461

  Fly   684 QNLG----------------------------------PFRCDICSDLVKTCDQYKVHRSAH--- 711
            :|:|                                  .|||..|:..:|...::..|...|   
Human   462 ENVGDAVQTKLIMLVDDFYYGRDGGKVAQLTNFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVEL 526

  Fly   712 -------DGTQPFICTLCGKGFQMPCNLTVHIR--------------------------RHRRD- 742
                   ||..  ||..|.:.|..|..|..|:.                          :|.:| 
Human   527 DQQNGEVDGHT--ICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDT 589

  Fly   743 -----FPYSCEQCDKRFATSTEVAIHLR-THTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTF 801
                 .||.|:.|..|.:..:||.:|.| .|...|..:|..|.|.||..:.|..|..||..::.:
Human   590 HKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVY 654

  Fly   802 HCPICAKGF-YEKNRFTDHMNSHWAIRK 828
            ||..|...| :.|::....:..|...||
Human   655 HCNKCRLQFLFAKDKIEHKLQHHKTFRK 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgrNP_001163089.2 MADF 334..425 CDD:214738
MADF 466..556 CDD:214738
MADF_DNA_bdg 595..682 CDD:463144 14/62 (23%)
C2H2 Zn finger 691..711 CDD:275368 4/19 (21%)
C2H2 Zn finger 719..739 CDD:275368 6/45 (13%)
COG5048 742..>824 CDD:227381 26/89 (29%)
C2H2 Zn finger 747..767 CDD:275368 7/20 (35%)
C2H2 Zn finger 775..795 CDD:275368 7/19 (37%)
C2H2 Zn finger 803..818 CDD:275368 4/15 (27%)
C2H2 Zn finger 831..851 CDD:275368
C2H2 Zn finger 859..877 CDD:275368
POGZNP_001397789.1 PLN02983 278..469 CDD:215533 16/71 (23%)
C2H2 Zn finger 503..536 CDD:275371 6/32 (19%)
C2H2 Zn finger 539..560 CDD:275368 6/20 (30%)
C2H2 Zn finger 569..590 CDD:275368 2/20 (10%)
C2H2 Zn finger 599..620 CDD:275368 7/20 (35%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
CENPB 1028..1089 CDD:197828
DDE_3 1169..>1280 CDD:481203
Blue background indicates that the domain is not in the aligned region.

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