DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lnpk and LNP1

DIOPT Version :9

Sequence 1:NP_001286201.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_012062.1 Gene:LNP1 / 856599 SGDID:S000001235 Length:278 Species:Saccharomyces cerevisiae


Alignment Length:348 Identity:60/348 - (17%)
Similarity:117/348 - (33%) Gaps:122/348 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVLEGLQTQIQALEKYMINTEERKRRFVTN--FVGFTIGAYIVGFGLWWYFYFPPTMQECFMYLV 78
            |.|..:.:||..|:..:..::....::.:|  |.|..:....:.:..|.|..:.|     ::.:.
Yeast    24 ADLSQITSQIHQLDVALKKSQSILSQWQSNLTFYGIALTVLALSYTYWEYHGYRP-----YLVVT 83

  Fly    79 PLLLFPIVIIF---LRRLFTWYFQRKLNKNGDKLTRLKEDKRKILEQVMDKETYKVAVNLLERFG 140
            .||....:|:|   |.:|:.:|...:|.    ||.:|:...:|.||::.::..|....::::|| 
Yeast    84 ALLCIGSLILFKWALTKLYAFYNNNRLR----KLAKLRAIHQKKLEKLKEETHYNATSSIIQRF- 143

  Fly   141 DKKQLRISGLPTGSTPNRPQVERSPLTVAAVARTSSAGGQQQQQRSL--------APYTSVYRNN 197
                                                :.|:.|...::        |.|..:    
Yeast   144 ------------------------------------SSGEDQNDDAMVLLDDELNAKYQEL---- 168

  Fly   198 NNNQNTSLNSSVISTHSLGQMTSASPQLRAVQELRRRSPFPIVDDRSRSAIDRIVDFIVGDSPKD 262
             ||..|.|......:|              |:.|::        :.|.:..|:|:..:.|.:..|
Yeast   169 -NNLKTELEKFKKESH--------------VKGLKK--------EDSDAWFDKIISVLAGGNELD 210

  Fly   263 RFG-------MICKACHAHNGMLPKEEYEYTT----FRCAFCNVLNPARKKRPVAPRLSLEAPSD 316
            ...       :||..||..:..     |...:    |.|..||                  ...|
Yeast   211 STSSLSPFKKIICPQCHWKSNC-----YRLASKPIIFICPHCN------------------HKID 252

  Fly   317 TANKRNDSSESE--SSDDDSDKE 337
            ...:|.|:.|::  :....|:||
Yeast   253 EVKEREDAIEAKQPAQPSQSEKE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_001286201.1 zinc_ribbon_10 247..297 CDD:287076 13/60 (22%)
LNP1NP_012062.1 COG5415 10..278 CDD:227702 60/348 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2846
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22166
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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