DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lnpk and AT4G31080

DIOPT Version :9

Sequence 1:NP_001286201.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001190877.1 Gene:AT4G31080 / 829235 AraportID:AT4G31080 Length:443 Species:Arabidopsis thaliana


Alignment Length:419 Identity:86/419 - (20%)
Similarity:149/419 - (35%) Gaps:130/419 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EKSTEAVLEGLQTQIQALEKYMINTEERKRRFVTNFVGFTIGAYIVGFGL---------WWYFYF 66
            ||..:.:.....|.:..:::..|:..:..|..:.:.|.|.|.|  ||:.:         |....|
plant    58 EKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSVLFEIIA--VGYAILTTRTEDLDWRMRSF 120

  Fly    67 PPTMQECFMYLVPLLLFPIV-------IIFLRRLFTWYFQRKLNK-NGDKLTRLKEDKRK----I 119
                     .::|:.:.|.|       |:...::|....|:.|.| ..::|.::.|.|.:    .
plant   121 ---------RILPMFILPAVSALAYSSIVSFSKMFDRRDQKTLEKLRAERLAKINELKERTNYYT 176

  Fly   120 LEQVMD-------KETYKVA---------------VNLLERF----------------------- 139
            .:|::.       ||....|               :.|::|:                       
plant   177 TQQLIQAWHSHATKERSMFADLKRLTTACRAGANRIVLMQRYDPDPAAKAAAATVLASKLGADSG 241

  Fly   140 -----GDKKQLRISGLPTGSTPNRPQVERSPLTVAAVARTSSAGGQQQQQRSLAPY----TSVYR 195
                 ||:.||.    |:....|..:|.:            |.|.:.::|.:..|:    ||.:.
plant   242 LKVYLGDESQLD----PSSGKSNDMEVNQ------------SRGLRNRRQPNTRPHGSGSTSTHH 290

  Fly   196 NNNNNQNTSLNSSVISTHSLGQ---MTSASPQLRAVQELRRRSPFPIVDDRSRSAIDRIVDFIVG 257
            :::.:.::..:.....|....|   :...|||..|..:              .|.|.||...:||
plant   291 SDDESHHSGTSERFPGTTEQNQQMLVEHYSPQGYAAHD--------------GSWISRIAALLVG 341

  Fly   258 DSPKDRFGMICKACHAHNGMLPKEEYEYTTFRCAFCNVLN-----------PARKKRPVAPRLSL 311
            :.|...:.:||..|..|||:..||::.|.|:.|..||.||           ||....|:...|.|
plant   342 EDPTQSYALICGNCRMHNGLARKEDFAYITYYCPHCNALNKPKHSEENVLLPAISASPITDSLPL 406

  Fly   312 EAPSDTANKRNDSSESESSDDDSDKEPSA 340
            ...|:..|..:.|||..||.....||.:|
plant   407 IETSEVVNSSSSSSERGSSPTPEIKEEAA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_001286201.1 zinc_ribbon_10 247..297 CDD:287076 19/49 (39%)
AT4G31080NP_001190877.1 zinc_ribbon_10 331..381 CDD:287076 19/49 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4163
eggNOG 1 0.900 - - E1_KOG2846
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I2513
OMA 1 1.010 - - QHG55649
OrthoDB 1 1.010 - - D1595535at2759
OrthoFinder 1 1.000 - - FOG0003331
OrthoInspector 1 1.000 - - otm2502
orthoMCL 1 0.900 - - OOG6_104219
Panther 1 1.100 - - O PTHR22166
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.930

Return to query results.
Submit another query.