DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lnpk and LNPK

DIOPT Version :9

Sequence 1:NP_001286201.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001291937.1 Gene:LNPK / 80856 HGNCID:21610 Length:494 Species:Homo sapiens


Alignment Length:446 Identity:136/446 - (30%)
Similarity:216/446 - (48%) Gaps:94/446 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GFVLSKL--RKEKSTEAVLEGLQTQIQALEKYMINTEERKRRFVTNFVGFTIGAYIVGFGLWWYF 64
            |:::..:  :.:.||..|||.:..:|||||::....:..::.:|...:.::...|:....:.:.:
Human    66 GWIIFSMEGKTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLIVYLW 130

  Fly    65 YFPPTMQECFMYLVPLLLFPIVIIFLRRLFTWYFQRKLNKNGDKLTRLKEDKRKILEQVMDKETY 129
            |.|..........:|...||::|..:|.:..::|.::..:|.:.|..||..::||||:||:||||
Human   131 YLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETY 195

  Fly   130 KVAVNLLERFG-DKK----------------------------QLRISGLPTGSTPNR---PQVE 162
            |.|..:||||. |.|                            |..:|  ||.::||:   |||.
Human   196 KTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLS--PTPASPNQGPPPQVP 258

  Fly   163 RSPLTVAAVARTSSAGGQQQQQRSLAPYTSVYRNNNNNQNTSLNSSVISTHSLGQMTSASPQLRA 227
            .||    ...:.|||.| ...:|::.|              :|:|:|:..| ||...::.|.:  
Human   259 VSP----GPPKDSSAPG-GPPERTVTP--------------ALSSNVLPRH-LGSPATSVPGM-- 301

  Fly   228 VQELRRRSP---FPIVDDRSRSAIDRIVDFIVGDSPKDRFGMICKACHAHNGMLPKEEYEYTTFR 289
              .|....|   .||: .|.|.|:||||:::|||.|::|:.:||:.|.:||||..|||:||..||
Human   302 --GLHPPGPPLARPIL-PRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFR 363

  Fly   290 CAFCNVLNPARKKRPVAPRL---SLE-------------APSDTA----NKRNDSS-ESESSDDD 333
            ||:|..||||||.||.||||   |.|             .||.:.    |:.|:.| |.:..||:
Human   364 CAYCFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLDDN 428

  Fly   334 S----DKEPSARRA--LLQKLPSGGADMDATAETEDLAMETETIETGSAAPSTAEV 383
            :    ||.|:..:.  :::| .|...:.:...|||:  .|...|||.|..|....:
Human   429 TEQTDDKIPATEQTNQVIEK-ASDSEEPEEKQETEN--EEASVIETNSTVPGADSI 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_001286201.1 zinc_ribbon_10 247..297 CDD:287076 27/49 (55%)
LNPKNP_001291937.1 PHA03247 <216..317 CDD:223021 28/127 (22%)
zinc_ribbon_10 321..371 CDD:370800 27/49 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158199
Domainoid 1 1.000 86 1.000 Domainoid score I8137
eggNOG 1 0.900 - - E1_KOG2846
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12319
Inparanoid 1 1.050 171 1.000 Inparanoid score I4113
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55649
OrthoDB 1 1.010 - - D1595535at2759
OrthoFinder 1 1.000 - - FOG0003331
OrthoInspector 1 1.000 - - oto91394
orthoMCL 1 0.900 - - OOG6_104219
Panther 1 1.100 - - LDO PTHR22166
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8618
SonicParanoid 1 1.000 - - X3815
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.