DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lnpk and lnpa

DIOPT Version :9

Sequence 1:NP_001286201.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_955774.1 Gene:lnpa / 326761 ZFINID:ZDB-GENE-030131-4960 Length:393 Species:Danio rerio


Alignment Length:411 Identity:132/411 - (32%)
Similarity:204/411 - (49%) Gaps:67/411 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVLSKLRKEKSTEAVLEGLQTQIQALEKYMINTEERKRRFVTNFVGFTIGAYIVGFGLWWYFY 65
            ||.|:|:.|.:.||..|||||...||.||:|.....::.:.:|...:.::...|::...:.:.:|
Zfish     1 MGAVVSRWRAKPSTVEVLEGLDKDIQVLEEYREKNHKQLKLWVYRLLLYSALLYLMACAVVYAWY 65

  Fly    66 FPPTMQECFMYLVPLLLFPIVIIFLRRLFTWYFQRKLNKNGDKLTRLKEDKRKILEQVMDKETYK 130
            .|..|....:...|.||||::|..||:|....:.::..:|.:||..||.:|:|||||||:.||||
Zfish    66 IPERMIGKLIVASPFLLFPLLIWLLRKLLIILYNKRTERNNEKLEELKAEKKKILEQVMETETYK 130

  Fly   131 VAVNLLERF--GDKKQLRISGLPTGS--TPNRPQVERS--------------PLTVAAVART--S 175
            .|..:||||  ..||:|.:...|.|.  ||.:.|..|.              |:...:|..|  |
Zfish   131 NAKLILERFDPDSKKKLELETQPIGPTVTPRQGQELRHRLVSPRPTGRPPPVPVPGPSVPGTPLS 195

  Fly   176 SAGGQQQQQRSLAPYTSVYRNNNNNQNTSLNSSVISTHSLGQMTSASPQLRAVQELRRRSPFPIV 240
            :.||..::..|.:...::.|.......|.:  .|:..|..|      |.|..          |::
Zfish   196 APGGPPEKGLSASTPQALIRRPGTPVGTPI--PVMGMHPPG------PPLAR----------PVL 242

  Fly   241 DDRSRSAIDRIVDFIVGDSPKDRFGMICKACHAHNGMLPKEEYEYTTFRCAFCNVLNPARKKRPV 305
             .|.|.|:||:::::|||.|::|:.:||:.|.:||||..|||:||..||||:|..||||||.||.
Zfish   243 -PRERGAVDRVIEYLVGDGPQNRYALICQQCLSHNGMALKEEFEYIAFRCAYCYFLNPARKTRPQ 306

  Fly   306 APRLSLEAPSDTANKRNDSSESESSDDD-----------SDKEPSARRALLQKLPSGGADMDATA 359
            ||||    |...|       |:::|.|.           |...|.::.|..:.:.:|    |...
Zfish   307 APRL----PEFAA-------EAKTSQDPPAVAMETDLPVSPPAPESKEAGPEPVKAG----DGDP 356

  Fly   360 ETEDLAMETETIETGSAAPST 380
            :|:::  .||.::.|...|.|
Zfish   357 QTDEI--PTEEMKPGDPEPHT 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_001286201.1 zinc_ribbon_10 247..297 CDD:287076 25/49 (51%)
lnpaNP_955774.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..209 14/62 (23%)
zinc_ribbon_10 250..298 CDD:287076 24/47 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..393 15/75 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6814
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12319
Inparanoid 1 1.050 183 1.000 Inparanoid score I3952
OMA 1 1.010 - - QHG55649
OrthoDB 1 1.010 - - D1595535at2759
OrthoFinder 1 1.000 - - FOG0003331
OrthoInspector 1 1.000 - - otm24844
orthoMCL 1 0.900 - - OOG6_104219
Panther 1 1.100 - - LDO PTHR22166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3815
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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