DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lnpk and SPCC1620.07c

DIOPT Version :9

Sequence 1:NP_001286201.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_588465.1 Gene:SPCC1620.07c / 2538940 PomBaseID:SPCC1620.07c Length:334 Species:Schizosaccharomyces pombe


Alignment Length:405 Identity:78/405 - (19%)
Similarity:147/405 - (36%) Gaps:99/405 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVLSKLRKEKSTEAVLEGLQTQIQALEKYMINTEERKRRFVTNFVGFTIGAYIVGFGLWWYFY 65
            ||:...| :||......|:.|:.:::..:..:.|.:.:|::.:..:...::..|.:|..:|    
pombe     1 MGWFFQK-KKEFDFGGELDRLEMKLEEAQYNIDNIQSQKKKILFRYTVCSLAIYTIGMAVW---- 60

  Fly    66 FPPTMQECFMYLVPLL--LFPIVIIFL--------RRLFTWYFQRKLNKNGDKLTRLKEDKRKIL 120
               ..:...::..||.  ||.|.:..|        |....|:.:::|::....|.:|..:|||||
pombe    61 ---ASRSSILFQHPLFSKLFRISLYILGVFSLYMFRWAIAWFCEKRLSRARMNLHKLNAEKRKIL 122

  Fly   121 EQVMDKETYKVAVNLLERFGDKKQLRISGLPTGSTPNRPQVERSPLTVAAVARTSSAGGQQQQQR 185
            :.:..::.|.....|||::|:                :|.:.:..|:.||.|::           
pombe   123 DALKSRKEYFETQALLEKYGE----------------QPTLAQKKLSNAAAAKS----------- 160

  Fly   186 SLAPYTSVYRNNNNNQNTSLNSSVISTHSLGQMTSASPQLRAVQELRRRSPFPIVDDRSRSAIDR 250
              .|                          |..:|:|..:                 ..:...||
pombe   161 --VP--------------------------GSSSSSSDPM-----------------HPQHWYDR 180

  Fly   251 IVDFIVG---DSPKDRFGMICKACHAHNGMLP-KEEYEYTTFRCAFCNVLN--PARKKRP---VA 306
            :::.:||   :|..:|..:||..|..|||:.. .|:.....:.|.||...|  |..|..|   :.
pombe   181 VLEGLVGANENSENNREALICSHCFHHNGLASYGEKASDVRYVCLFCKAWNGPPIDKSLPSSEMD 245

  Fly   307 PRLSLEAPSDTANKRNDSSESESSDDDSDKEPSARRALLQKLPSGGADMDATAETEDLAMETETI 371
            ..|.....|.:..|:|:|:.:.....:....|....|......:|.........|..|:..:...
pombe   246 SNLQTNPSSISKGKKNNSNNTTQKGPNIISSPQVINASSPVRKAGKKKSKKALPTSPLSSSSPDA 310

  Fly   372 ETGSAAPSTAEVAAS 386
            ...|.:.|...||||
pombe   311 SYNSVSDSFHTVAAS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_001286201.1 zinc_ribbon_10 247..297 CDD:287076 16/53 (30%)
SPCC1620.07cNP_588465.1 COG5415 1..264 CDD:227702 66/342 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 49 1.000 Domainoid score I3446
eggNOG 1 0.900 - - E1_KOG2846
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I1765
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003331
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104219
Panther 1 1.100 - - LDO PTHR22166
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8618
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.850

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