DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lnpk and lnp-1

DIOPT Version :10

Sequence 1:NP_610395.1 Gene:Lnpk / 35842 FlyBaseID:FBgn0033309 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001348785.1 Gene:lnp-1 / 180731 WormBaseID:WBGene00015492 Length:346 Species:Caenorhabditis elegans


Alignment Length:394 Identity:98/394 - (24%)
Similarity:158/394 - (40%) Gaps:75/394 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVLSKLRKEKSTEAVLEGLQTQIQALEKYMINTEERKRRFV------TNFVGFTIGAYIVGFG 59
            ||.:.|: .|..:||            ||:..::.::.|:|..      ||.:.:...:.:|...
 Worm     1 MGNLFSR-NKSPATE------------LERVALSIDDLKKRLQTISSSNTNTLYYYYMSIVVILS 52

  Fly    60 L-----WWYFYFP-PTMQECFMYLVPLLLFPIVIIFL-RRLFTWYFQRKLNKNGDKLTRLKEDKR 117
            :     |..|..| .|...|     .|:|..|.|:.. |.:...:|..:.|:...||......|.
 Worm    53 IAMAHTWLRFEDPQKTYVAC-----ALMLGAIGIVLAGRYVINGFFSWRTNRTTQKLENAISQKT 112

  Fly   118 KILEQVMDKETYKVAVNLLERFGDKKQLRISGLPTGSTPNRPQVERSPLTVAAVARTSSAGGQQQ 182
            .:|:.|.:...:|.|..:|:|: :|.:...:.....||...|    ||:.......:..|..:|:
 Worm   113 TLLDLVKETLKFKEAKEILDRY-EKIEQNTTIDKNDSTLKSP----SPIKKLTADSSMFATPKQE 172

  Fly   183 QQRSLAPYTSVYRNNNNNQNTSLNSSVISTHSLGQMTSASPQLRAVQELRRRSPFPIVDDRSRSA 247
            |:|...|       .....|:::||.        .||....:.|....:|   ||.    |..:|
 Worm   173 QKRVETP-------TAQGPNSAMNSM--------NMTPYHQRNRNAVPIR---PFL----RQTTA 215

  Fly   248 IDRIVDFIVGDSPKDRFGMICKACHAHNGMLPKEEYEYTTFRCAFCNVLNPARK----------- 301
            .||::|:.:.|.|..|..:||..||.||||....||.|.:|||..|..||||:|           
 Worm   216 FDRVLDYFMSDGPNCRNALICSICHTHNGMSTPAEYPYISFRCFECGHLNPAKKMGYIFRPQIPL 280

  Fly   302 -KRPVAPRLSLEAPSDTANKRNDSSESESSDDDSDKEPSARRALLQKLPSGGADMDATAETEDLA 365
             :.|:.|: .::.........|..:..|:....:|..|||.:...:|    |:|.:.....|...
 Worm   281 TRPPMGPK-GIQHNGRVGPSENTHNMMENQKPSTDLTPSASQNGSEK----GSDSENEKVPESKT 340

  Fly   366 METE 369
            ||||
 Worm   341 METE 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LnpkNP_610395.1 zinc_ribbon_10 247..297 CDD:401882 22/49 (45%)
lnp-1NP_001348785.1 zinc_ribbon_10 215..265 CDD:401882 22/49 (45%)

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