DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42326 and ZC449.1

DIOPT Version :10

Sequence 1:NP_001286200.1 Gene:CG42326 / 35838 FlyBaseID:FBgn0259226 Length:1376 Species:Drosophila melanogaster
Sequence 2:NP_508855.1 Gene:ZC449.1 / 180775 WormBaseID:WBGene00022611 Length:454 Species:Caenorhabditis elegans


Alignment Length:484 Identity:84/484 - (17%)
Similarity:135/484 - (27%) Gaps:215/484 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   890 YNVPTLTECERLC-----SDPRPSFVCHTFSYRYNQAGRDNCMLCDRPINMLDYYVDIEPDRDYD 949
            |....||.|.:.|     :.|....:|..|:|   :..:..|.|.|...:.:.  ..|.|....|
 Worm    41 YRRTALTMCTQHCIMAAGNGPEGGSICKAFTY---ELDKQLCRLYDNDGHKIP--AVIHPIMGTD 100

  Fly   950 IYSMADDMDVCRQPPPRRH----------------------------DTAGPST--------AIS 978
            |:....||..|..|...:|                            |...|:.        |:|
 Worm   101 IFYRTSDMGECAGPMSGQHMNPNFVKLNNGKNSLKSSVDKNRNFKISDLPSPTNDQFLQKAKAMS 165

  Fly   979 DPRNAQCFFRAIDATRFFKSIVR--DSLTVRSVGECE------------MECIRSTKF------- 1022
            .|     ..|..|.....:|.:|  :||...|..:.|            ::|..|:.:       
 Worm   166 SP-----MVRMEDMDEVLRSKLRGEESLVPMSQKDTEEGKELDKTENGPLKCKTSSGYYVVVGNE 225

  Fly  1023 -------------------TCRAFAFRYGQQRHA--GVIDNCQ-LSDWPVRDMDKERHLILDAAF 1065
                               .|.    :|..:...  |...||: |:.:||   :|:         
 Worm   226 IVLPISGGDVQVYNEVEQGDCA----KYCSENKGPDGSTINCRSLNYFPV---EKK--------- 274

  Fly  1066 DIFERASYGHGCEIQPIVDEKH--------------KKLCYLGYGSPARLLPPA----------- 1105
                       ||:..|:.|.|              :|.|          ||.:           
 Worm   275 -----------CELYGILAEPHGSGKLLENEKVIYAEKFC----------LPESPFVCQNDEIFI 318

  Fly  1106 --IKKVISVPSEIA---------CKKECIRFRETTPFKCFAFSYGSHASSFNCELSDLDQTELKQ 1159
              ::|.:|....|.         |.::|:...:     |.:..|.|  :|..|||.::|.:    
 Worm   319 LHVQKTLSKRRRITTKAASSITDCLRKCLEQDD-----CRSSVYIS--NSKKCELHNVDVS---- 372

  Fly  1160 DVHYAHTKDRDFWLFAWNPFDWTCRDKVNTIGGSRVNNDRRMDIFREPGDVAWRHYTVSGKPCRR 1224
            ...||...||:..|..                    |..||..:                .|.|:
 Worm   373 TGDYARDSDRETVLIE--------------------NGCRRKGV----------------TPKRK 401

  Fly  1225 SSPCAKNLI-TGFYSCETDASEVGSWDYC 1252
            .||...::: |.....|:.:...|.|..|
 Worm   402 DSPSLSSILDTSSSESESSSPSNGGWSEC 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42326NP_001286200.1 PAN_AP 44..>104 CDD:214680
PHA03247 <224..416 CDD:223021
PAN_AP_HGF 468..560 CDD:238532
PAN_AP_HGF 870..953 CDD:238532 16/67 (24%)
PAN_AP_HGF 984..1070 CDD:238532 19/128 (15%)
ZC449.1NP_508855.1 PAN_AP 21..105 CDD:214680 16/68 (24%)
PAN_1 230..303 CDD:459635 15/99 (15%)
PAN_1 317..391 CDD:459635 19/104 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.