DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and cyp26c1

DIOPT Version :10

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001025122.2 Gene:cyp26c1 / 554036 ZFINID:ZDB-GENE-050714-2 Length:554 Species:Danio rerio


Alignment Length:594 Identity:132/594 - (22%)
Similarity:213/594 - (35%) Gaps:180/594 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TVGLLLYVKLRWHYSYWSRRGVAGERPVYFRGNMSG--LGRDLHW--TDINLRIYRKFRGVERYC 70
            ||.||...:|.|.:.:...|....:.|:. :|:|..  :|...||  ...:..|.|:    |::.
Zfish    22 TVLLLAVSRLLWEFRWSITRDRTCKLPLP-QGSMGWPLVGETFHWLFQGSSFHISRR----EKHG 81

  Fly    71 GYFT--FMTKSLF-IMDLELIRDIMIRDFSSFADRGLFHNVRDDPLTGNLLFLDGPE-------- 124
            ..|.  .:.|.|. :...|.||.|::.:          |.|.......:...:.||.        
Zfish    82 KVFKTHLLGKPLIRVTGAENIRKILLGE----------HTVVCTQWPQSTRIILGPNTLVNSVGD 136

  Fly   125 -WRWLRQNLTQVFTSGKMKFMFPNMVE-VGEKLTQACRLQVGEIE----AKDLCARFTTDVIGSC 183
             .:..|:.|.:||:.|.::.....:.: |..::.:.| .:.|.:|    ||.|..|....|:   
Zfish   137 LHKRKRKVLAKVFSRGALEAYLTRLQDVVKSEIAKWC-TETGSVEVYTAAKSLTFRIAVRVL--- 197

  Fly   184 AFGLECNSLQ---------------------DPESQFRRMGRSVTQEPLHSVLVQAFMFAQPELA 227
             .||.....|                     .|.|..|:..|:  :|.|||.:       :..:.
Zfish   198 -LGLHLEEQQITYLSKTFEQLMNNLFSLPIDTPVSGLRKGIRA--REILHSAM-------EKIIE 252

  Fly   228 RKLRFRLFRPEVSEFFLDTVRQTLDYRRRENIHRNDLIQLLMELGEEGVKDALSFEQIAAQALVF 292
            .||:    :.:.|::.     ...|| ...:...||....:.||.|..|:            |:|
Zfish   253 EKLK----KQQASDYC-----DAFDY-MLSSARENDYELTMQELKETAVE------------LIF 295

  Fly   293 FLAGFDTSSTTMSFCLYELALNPDVQERLRVEV--------------------------LAVLKR 331
              |...|:::..:..:.:|..:|||.||.|.|:                          .|..|.
Zfish   296 --AAHSTTASASTSLIMQLLRHPDVSERARAELESEGLITDGHGHCRSRCNGNAISEEGEAAEKS 358

  Fly   332 NN------QKLTY---------------------DSVQEMPYLDQVVAETLRKYPILPHLLRR-- 367
            .:      .|.||                     :.:.::.|||.||.|.||..|.:....|.  
Zfish   359 TSDRRSAINKATYFEAGDKEEGRRSRTHVPYLSLEKLSQLSYLDCVVKEVLRFLPPVSGGYRTVL 423

  Fly   368 STKE---YQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRF--EPEEIKARHPFAYLP 427
            .|.|   ||||.       |..::..:...|...|.|.:||.|||.||  ..||.|:.. |:|:|
Zfish   424 QTFELNGYQIPK-------GWSVMYSIRDTHETAEAYQNPELFDPDRFCVGREESKSER-FSYVP 480

  Fly   428 FGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSRSEKT-----QIPLKFSSRNFLISTQEGVHL-- 485
            ||.|.|.|||.....:.:|...|.||.....:.:.:|     .:|        ::....|:|:  
Zfish   481 FGGGVRRCIGRELALIVLKTLAVELLATADCTLATQTYPRMQTVP--------IVHPVNGLHVFF 537

  Fly   486 --RMEGLER 492
              |.:|:||
Zfish   538 NYRTQGIER 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 CYP6-like 67..484 CDD:410679 112/519 (22%)
cyp26c1NP_001025122.2 cytochrome_P450 59..537 CDD:477761 118/545 (22%)

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