DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and Cyp12a4

DIOPT Version :9

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster


Alignment Length:489 Identity:117/489 - (23%)
Similarity:211/489 - (43%) Gaps:104/489 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NLRIYRKFRGVERYCGYFTFMTKSL----FI-----MDLELIRDIMIRDFSSFADRGLFHN---- 107
            |:.:...|..:.:..|...||...:    |:     .|.|::          |.:.|::.|    
  Fly    71 NMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQDFEVV----------FRNEGVWPNRPGN 125

  Fly   108 ---------VRDDPLTG--NLLFLDGPEWRWLRQNLTQVFTSGK-MKFMFPNMVEVGEKLTQACR 160
                     .|.|...|  .::...|..|...|..:..|....| ::..:..|.:|.::..|.. 
  Fly   126 YTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRI- 189

  Fly   161 LQVGE---IEAK----DLCARFTTDVIGSCA----FGLECNSLQDPES--------QFRRMGRSV 206
            |::.:   :||.    |...|:|.:.:...|    .||..||.::.|:        :|..:...:
  Fly   190 LELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDL 254

  Fly   207 TQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQTLDYRRRENIHRNDLIQLLMEL 271
            ..:|.....::.     |:|.|.:|......||:..::|...:.||...:|.:.|.:..|.::| 
  Fly   255 EMKPSPWRYIKT-----PKLKRLMRALDGIQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVLE- 313

  Fly   272 GEEGVKDALSFEQIAA--QALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQ 334
                  ..|..::..|  .|:...:||.||:|:|.:..|..||.||:.|.|||.||:.||...|.
  Fly   314 ------KLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNS 372

  Fly   335 KLTYDSVQEMPYLDQVVAETLRKYPIL---PHLLRRST--KEYQIPNSNLILEPGSKIIIPVHSI 394
            :.|..|::.:|||...:.|:.|.:|::   ..:|.|..  ..|::|....:      .|:|::::
  Fly   373 EFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYV------NIVPLNAL 431

  Fly   395 HHDPELYPDPEKFDPSRF--EPE---------EIKARHPFAYLPFGEGPRNCIGERFGKLQVKVG 448
            ..| |.:|...:|.|.|:  .|:         |:|:.:||.:||||.|||.|:|:|..::::::|
  Fly   432 TRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELG 495

  Fly   449 LVYLLRDFKFSRSEKTQ------------IPLKF 470
            ...|:|:|....:..|:            |||||
  Fly   496 TARLIRNFNVEFNYPTENAFRSALINLPNIPLKF 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 117/489 (24%)
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 116/488 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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